RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 LGI3Q8N145 548 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 OR52I1Q8NGK6 324 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 C3orf30Q96M34 536 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 ADAMTS5Q9UNA0 930 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 M0R1B8 84 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 ADAM10O14672 748 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 HTRA3P83110 453 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 ZNF85Q03923 595 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 FAM111BQ6SJ93 734 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 PLXDC2Q6UX71 529 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 FAM58AQ8N1B3 248 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 CLDN22Q8N7P3 220 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 PNPLA1Q8N8W4 532 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 CCDC74AQ96AQ1 378 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 LAMP3Q9UQV4 416 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 ADPRMQ3LIE5 342 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 C4orf17Q53FE4 359 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 ANGPTL5Q86XS5 388 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 TDHQ8IZJ6 230 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 EXO1Q9UQ84 846 aaKnown RBP10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 AHCTF1Q8WYP5 2266 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 PLXNA1Q9UIW2 1896 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 BHLHE40O14503 412 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 TBXA2RP21731 343 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 RBP2P50120 134 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 PRAMEF5Q5TYX0 476 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 PRAMEF6Q5VXH4 476 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 SLCO4C1Q6ZQN7 724 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 TSEN54Q7Z6J9 526 aaKnown RBP10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 EXD3Q8N9H8 876 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 TMEM255BQ8WV15 326 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 ZBP1Q9H171 429 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 TAF9BQ9HBM6 251 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 POM121CA8CG34 1229 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 GALR2O43603 387 aaPredicted RBP10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 SDHBP21912 280 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 DEFA6Q01524 100 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 OR2G6Q5TZ20 316 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 ENTHD1Q8IYW4 607 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 PLPP7Q8NBV4 271 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 NPFFR2Q9Y5X5 522 aa10.25□□□□□ -0.77
CCDC144B-208ENST00000618081 COL11A1P12107 1806 aaPredicted RBP10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 PMPCAQ10713 525 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 LSRQ86X29 649 aaPredicted RBP10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 OR2AK2Q8NG84 335 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 SLC37A2Q8TED4 501 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 SARAFQ96BY9 339 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 TM4SF18Q96CE8 201 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 TECTBQ96PL2 329 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 OR2A14Q96R47 310 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 OSGIN2Q9Y236 505 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 GOLT1BQ9Y3E0 138 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 C5orf49A4QMS7 147 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 FPR3P25089 353 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 OR10A3P58181 314 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 RPL27P61353 136 aaKnown RBP10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 LAX1Q8IWV1 398 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 RANGRFQ9HD47 186 aaPredicted RBP10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 DLL4Q9NR61 685 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 TIMM10BQ9Y5J6 103 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 ATP6V1G2-DDX39BF2Z307 99 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 H0YIG0 161 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 AKR7A3O95154 331 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 BTNL8Q6UX41 500 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 HIST2H3AQ71DI3 136 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 UBAC2Q8NBM4 344 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 PXT1Q8NFP0 134 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 OR8U1Q8NH10 309 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 CHRM2P08172 466 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 ALDOCP09972 364 aaKnown RBP10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 CLDN12P56749 244 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 SMAD4Q13485 552 aaKnown RBP10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 TPBGQ13641 420 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 GLIPR1L1Q6UWM5 242 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 CHST8Q9H2A9 424 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 ZNF628Q5EBL2 1059 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 LRRC15Q8TF66 581 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 PIGTQ969N2 578 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 RASD2Q96D21 266 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 DOCK7Q96N67 2140 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 GLRA1P23415 457 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 ACKR3P25106 362 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 ZNF740Q8NDX6 193 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 SLC29A1Q99808 456 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 BCO1Q9HAY6 547 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 DSCR3O14972 297 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 CRYAAP02489 173 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 IVDP26440 423 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 RPS25P62851 125 aaKnown RBP10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 TMEM52BQ4KMG9 183 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 OR1M1Q8NGA1 313 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 THAP10Q9P2Z0 257 aaPredicted RBP10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 PPP1R3CQ9UQK1 317 aa10.24□□□□□ -0.77
CCDC144B-208ENST00000618081 AKAP6Q13023 2319 aa10.23□□□□□ -0.77
CCDC144B-208ENST00000618081 DDX60LQ5H9U9 1706 aaKnown RBP10.23□□□□□ -0.77
CCDC144B-208ENST00000618081 BCL6P41182 706 aa10.23□□□□□ -0.77
CCDC144B-208ENST00000618081 LRRC26Q2I0M4 334 aa10.23□□□□□ -0.77
CCDC144B-208ENST00000618081 IAH1Q2TAA2 248 aaPredicted RBP10.23□□□□□ -0.77
CCDC144B-208ENST00000618081 MFSD12Q6NUT3 480 aa10.23□□□□□ -0.77
CCDC144B-208ENST00000618081 FAM71CQ8NEG0 241 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms