RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 CD74P04233 296 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 C1SP09871 688 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 EPHA1P21709 976 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 S100GP29377 79 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 HNRNPA3P51991 378 aaKnown RBP6.75□□□□□ -1.33
PDE6A-205ENST00000617647 RANP62826 216 aaKnown RBP6.75□□□□□ -1.33
PDE6A-205ENST00000617647 GAS6Q14393 721 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 NUMA1Q14980 2115 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 CEBPEQ15744 281 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 EOGTQ5NDL2 527 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 RPL22L1Q6P5R6 122 aaKnown RBP6.75□□□□□ -1.33
PDE6A-205ENST00000617647 TMEM220Q6QAJ8 160 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 MBOAT2Q6ZWT7 520 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 COMMD6Q7Z4G1 85 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 C17orf78Q8N4C9 275 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 OR52E2Q8NGJ4 325 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 OR5AK2Q8NH90 309 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 ADAMTS15Q8TE58 950 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 KLK6Q92876 244 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 CIB3Q96Q77 187 aaPredicted RBP6.75□□□□□ -1.33
PDE6A-205ENST00000617647 LYSMD1Q96S90 227 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 TUBA4BQ9H853 241 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 MTFP1Q9UDX5 166 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 TMED3Q9Y3Q3 217 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 CCL27Q9Y4X3 112 aa6.75□□□□□ -1.33
PDE6A-205ENST00000617647 PIKFYVEQ9Y2I7 2098 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 A0A087WUU8 490 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 F6UZH7 168 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 ITGB1BP1O14713 200 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TAAR5O14804 337 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 FFAR1O14842 300 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 STK17BO94768 372 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 PPP1R3DO95685 299 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 SERPINA7P05543 415 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 RAC2P15153 192 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TYRP1P17643 537 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 FCGR2CP31995 323 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 YBEYP58557 167 aaPredicted RBP6.74□□□□□ -1.33
PDE6A-205ENST00000617647 RAB11AP62491 216 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TIAL1Q01085 375 aaKnown RBP eCLIP6.74□□□□□ -1.33
PDE6A-205ENST00000617647 ARFRP1Q13795 201 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 NKAIN1Q4KMZ8 207 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 OR9A1PQ8NGU1 263 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 OR4K13Q8NH42 304 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 GRHL3Q8TE85 626 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 ROBO4Q8WZ75 1007 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 MIB2Q96AX9 1013 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TMEM169Q96HH4 297 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 SCGB3A2Q96PL1 93 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 RAB22AQ9UL26 194 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 CACNA1CQ13936 2221 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TBC1D3DA0A087WVF3 549 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TBC1D3IA0A087WXS9 549 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TBC1D3EA0A087X179 549 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TBC1D3KA0A087X1G2 549 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TBC1D3BA6NDS4 549 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TBC1D3FA6NER0 549 aaPredicted RBP6.74□□□□□ -1.33
PDE6A-205ENST00000617647 A8MXE2 369 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TBC1D3LB9A6J9 549 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 C9J4A7 227 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 MKRN2OSH3BPM6 223 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TP53I11O14683 189 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 PPIHO43447 177 aaKnown RBP6.74□□□□□ -1.33
PDE6A-205ENST00000617647 CA11O75493 328 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TBX6O95947 436 aaPredicted RBP6.74□□□□□ -1.33
PDE6A-205ENST00000617647 IGHA1P01876 353 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 GUSBP08236 651 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TBC1D3HP0C7X1 549 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 NCBP2P52298 156 aaKnown RBP eCLIP6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TAS2R31P59538 309 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 RPL23AP62750 156 aaKnown RBP6.74□□□□□ -1.33
PDE6A-205ENST00000617647 SQSTM1Q13501 440 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 PPP1R1AQ13522 171 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 JOSD1Q15040 202 aaPredicted RBP6.74□□□□□ -1.33
PDE6A-205ENST00000617647 PNLIPRP3Q17RR3 467 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TMEM183BQ1AE95 376 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 GPR157Q5UAW9 335 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TBC1D3GQ6DHY5 549 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TBC1D3CQ6IPX1 549 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 FBXL22Q6P050 247 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 C16orf54Q6UWD8 224 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 NUP54Q7Z3B4 507 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 SLC35F2Q8IXU6 374 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TBC1D3Q8IZP1 549 aaPredicted RBP6.74□□□□□ -1.33
PDE6A-205ENST00000617647 FAM160A2Q8N612 972 aaPredicted RBP6.74□□□□□ -1.33
PDE6A-205ENST00000617647 LFNGQ8NES3 379 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 ARRDC2Q8TBH0 407 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 LCN9Q8WX39 176 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 EDAQ92838 391 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 MCHR2Q969V1 340 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 CCDC74AQ96AQ1 378 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TAAR9Q96RI9 348 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 DIRC2Q96SL1 478 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 ZNF2Q9BSG1 426 aaPredicted RBP6.74□□□□□ -1.33
PDE6A-205ENST00000617647 TRMT61BQ9BVS5 477 aaKnown RBP6.74□□□□□ -1.33
PDE6A-205ENST00000617647 NEUROD4Q9HD90 331 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 ETV7Q9Y603 341 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 FAM230AA0A1W2PPH8 454 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 FAM171A2A8MVW0 826 aa6.74□□□□□ -1.33
PDE6A-205ENST00000617647 H3BQ15 152 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms