RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 NOTCH2Q04721 2471 aa11.53□□□□□ -0.56
MDC1-209ENST00000613547 ATP6V1G2-DDX39BF2Z307 99 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 HS3ST1O14792 307 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 MPZL1O95297 269 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 GYPBP06028 91 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 CELA3BP08861 270 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 CDC42P60953 191 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 ADAM8P78325 824 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 GALK2Q01415 458 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 TBC1D28Q2M2D7 210 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 ZNF672Q499Z4 452 aaPredicted RBP11.52□□□□□ -0.57
MDC1-209ENST00000613547 KLHL12Q53G59 568 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 C12orf73Q69YU5 71 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 CPOQ8IVL8 374 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 PACRGLQ8N7B6 248 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 SLC30A7Q8NEW0 376 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 OR4F15Q8NGB8 312 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 AKAP1Q92667 903 aaKnown RBP eCLIP11.52□□□□□ -0.57
MDC1-209ENST00000613547 FBXW5Q969U6 566 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 MS4A3Q96HJ5 214 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 LURAP1Q96LR2 239 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 RDH12Q96NR8 316 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 OR51V1Q9H2C8 321 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 VCXQ9H320 206 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 MED20Q9H944 212 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 CDH20Q9HBT6 801 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 FAIMQ9NVQ4 179 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 H2AFY2Q9P0M6 372 aaPredicted RBP11.52□□□□□ -0.57
MDC1-209ENST00000613547 NDRG4Q9ULP0 352 aaKnown RBP11.52□□□□□ -0.57
MDC1-209ENST00000613547 ATP23Q9Y6H3 246 aa11.52□□□□□ -0.57
MDC1-209ENST00000613547 IGHV2OR16-5A0A0B4J2B6 119 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 VSTM5A8MXK1 200 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 SHISA9B4DS77 424 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 SGCEO43556 437 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 GLCEO94923 617 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 GPANK1O95872 356 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 PLAUP00749 431 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 TFP02787 698 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 SCG5P05408 212 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 EPHA2P29317 976 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 GSTT1P30711 240 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 GDI2P50395 445 aaKnown RBP11.51□□□□□ -0.57
MDC1-209ENST00000613547 RPS7P62081 194 aaKnown RBP11.51□□□□□ -0.57
MDC1-209ENST00000613547 PSG4Q00888 419 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 SPOCK1Q08629 439 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 MEP1BQ16820 701 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 LRRC36Q1X8D7 754 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 ZIK1Q3SY52 487 aaPredicted RBP11.51□□□□□ -0.57
MDC1-209ENST00000613547 SLC35D3Q5M8T2 416 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 LCN1P1Q5VSP4 162 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 C20orf204Q6ZNR8 217 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 ZNF611Q8N823 705 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 GJC3Q8NFK1 279 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 OR51L1Q8NGJ5 315 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 TMEM163Q8TC26 289 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 ZNF75AQ96N20 296 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 SLC29A1Q99808 456 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 HCAR1Q9BXC0 346 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 PLEKHF2Q9H8W4 249 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 IMPAD1Q9NX62 359 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 SMPD3Q9NY59 655 aaPredicted RBP11.51□□□□□ -0.57
MDC1-209ENST00000613547 PLEK2Q9NYT0 353 aa11.51□□□□□ -0.57
MDC1-209ENST00000613547 CISD1Q9NZ45 108 aaKnown RBP11.51□□□□□ -0.57
MDC1-209ENST00000613547 A0A1W2PPR1 153 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 TVP23AA6NH52 213 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 TLX2O43763 284 aaPredicted RBP11.5□□□□□ -0.57
MDC1-209ENST00000613547 PRKYO43930 277 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 DOK2O60496 412 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 SNAP29O95721 258 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 CLUP10909 449 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 STOMP27105 288 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 APEX1P27695 318 aaKnown RBP11.5□□□□□ -0.57
MDC1-209ENST00000613547 POLR2IP36954 125 aaKnown RBP11.5□□□□□ -0.57
MDC1-209ENST00000613547 KRTAP10-9P60411 292 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 RPS23P62266 143 aaKnown RBP11.5□□□□□ -0.57
MDC1-209ENST00000613547 SLC34A1Q06495 639 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 DBPQ10586 325 aaPredicted RBP11.5□□□□□ -0.57
MDC1-209ENST00000613547 RAB35Q15286 201 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 ZNF774Q6NX45 483 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 ARL9Q6T311 187 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 UNQ6126/PRO20091Q6UXV3 157 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 MYPOPQ86VE0 399 aaPredicted RBP11.5□□□□□ -0.57
MDC1-209ENST00000613547 ZNF584Q8IVC4 421 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 GALNT4Q8N4A0 578 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 TCEANCQ8N8B7 351 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 ZNF555Q8NEP9 628 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 OR8J1Q8NGP2 316 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 AKR7LQ8NHP1 331 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 FAM81AQ8TBF8 368 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 PTP4A1Q93096 173 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 GRIP2Q9C0E4 1043 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 HDHD2Q9H0R4 259 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 WNT5BQ9H1J7 359 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 TOR3AQ9H497 397 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 RNPEPL1Q9HAU8 725 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 HINT3Q9NQE9 182 aaKnown RBP11.5□□□□□ -0.57
MDC1-209ENST00000613547 ATPIF1Q9UII2 106 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 COMMD3-BMI1R4GMX3 469 aa11.5□□□□□ -0.57
MDC1-209ENST00000613547 CELSR2Q9HCU4 2923 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 CASQ2O14958 399 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms