RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 ZDHHC8Q9ULC8 765 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 A4GNTQ9UNA3 340 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 LOC100653049A0A140TA62 436 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 A0A1W2PPL8 197 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 GMNCA6NCL1 334 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 MRASO14807 208 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 SPRY1O43609 319 aaPredicted RBP11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 KRT34O76011 436 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 ADH4P08319 380 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 EGR1P18146 543 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 FUT4P22083 530 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 GATA3P23771 443 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 YAP1P46937 504 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 PCBD1P61457 104 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 KLF10Q13118 480 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 HNRNPA0Q13151 305 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 LRRC23Q53EV4 343 aaPredicted RBP11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 RFPL4BQ6ZWI9 263 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 TREML1Q86YW5 311 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 LRRC75AQ8NAA5 344 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 OR51A7Q8NH64 312 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 FNDC8Q8TC99 324 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 ST7LQ8TDW4 575 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 GEMIN6Q8WXD5 167 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 C22orf15Q8WYQ4 148 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 DCLRE1CQ96SD1 692 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 OPN4Q9UHM6 478 aa11.33□□□□□ -0.6
POLR2J3-219ENST00000608621 HTR3EA5X5Y0 456 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 IGHMP01871 453 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 SCG5P05408 212 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 SBK2P0C263 348 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 FPR2P25090 351 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 ZFP36P26651 326 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 IFNA8P32881 189 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 RBMXP38159 391 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 LIMS1P48059 325 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 ARHGDIAP52565 204 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 SELENOWP63302 87 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 TNFAIP6P98066 277 aaPredicted RBP11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 SF3A3Q12874 501 aaKnown RBP eCLIP11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 PSG7Q13046 419 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 ENDOGQ14249 297 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 COQ5Q5HYK3 327 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 ARL9Q6T311 187 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 FOXL2NBQ6ZUU3 175 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 MICU2Q8IYU8 434 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 BPIFB2Q8N4F0 458 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 ZDHHC22Q8N966 263 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 PRRC1Q96M27 445 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 DIRC2Q96SL1 478 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 ESM1Q9NQ30 184 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 DCAF16Q9NXF7 216 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 RHCGQ9UBD6 479 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 CGGBP1Q9UFW8 167 aaPredicted RBP11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 EGFL7Q9UHF1 273 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 NPTNQ9Y639 398 aa11.32□□□□□ -0.6
POLR2J3-219ENST00000608621 TRAV27A0A087WT01 109 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 A6NIZ1 184 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 C12orf71A8MTZ7 269 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 H3BSA7 217 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 J3KTA2 159 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 TIMM8AO60220 97 aaPredicted RBP11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 ICMTO60725 284 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 PRSS23O95084 383 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 FSHBP01225 129 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 CD55P08174 381 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 MSR1P21757 451 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 RAP1BP61224 184 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 RAP1AP62834 184 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 PRKCDQ05655 676 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 CDK5R2Q13319 367 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 FHL1Q13642 323 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 MTX3Q5HYI7 312 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 HDXQ7Z353 690 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 SYT9Q86SS6 491 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 OAFQ86UD1 273 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 NRMQ8IXM6 262 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 SGMS2Q8NHU3 365 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 ZMYND19Q96E35 227 aaPredicted RBP11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 POFUT1Q9H488 388 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 EMC7Q9NPA0 242 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 GID8Q9NWU2 228 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 SNX13Q9Y5W8 968 aa11.31□□□□□ -0.6
POLR2J3-219ENST00000608621 ELOVL7A1L3X0 281 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 BBIP1A8MTZ0 92 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 EFCAB9A8MZ26 197 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 FAM220BPB1ANY3 271 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 H7C1C5 153 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 FOXH1O75593 365 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 IGHV2-70P01814 119 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 LCN6P62502 163 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 ANKDD1AQ495B1 522 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 ZMAT1Q5H9K5 638 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 FAM205BPQ63HN1 556 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 ZER1Q7Z7L7 766 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 PCYOX1LQ8NBM8 494 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 OR2T12Q8NG77 320 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 LZICQ8WZA0 190 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 DVL3Q92997 716 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 FNDC11Q9BVV2 318 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms