RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 SARAFQ96BY9 339 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 TRMT61AQ96FX7 289 aaKnown RBP10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 DCBLD2Q96PD2 775 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 TM9SF2Q99805 663 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 TMED9Q9BVK6 235 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CDADC1Q9BWV3 514 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ULBP2Q9BZM5 246 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 COMMD4Q9H0A8 199 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 PALMDQ9NP74 551 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 GALNT8Q9NY28 637 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CRNNQ9UBG3 495 aaPredicted RBP10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ING1Q9UK53 422 aaPredicted RBP10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 IKZF2Q9UKS7 526 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ACACAQ13085 2346 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 DOCK7Q96N67 2140 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 A0A1W2PPL8 197 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ACOD1A6NK06 481 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ZNF879B4DU55 563 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ZNF878C9JN71 531 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CRYABP02511 175 aaKnown RBP10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 RAF1P04049 648 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ITGB2P05107 769 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 INHBBP09529 407 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 UCHL1P09936 223 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 PSKH1P11801 424 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 PAX7P23759 505 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 MYL9P24844 172 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CTSSP25774 331 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 OPRL1P41146 370 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 MMP16P51512 607 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 TMPRSS3P57727 454 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 HIST1H3AP68431 136 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 HIST2H3PS2Q5TEC6 136 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 FAM27BQ5VT28 67 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 HIST2H3AQ71DI3 136 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ZNF627Q7L945 461 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 DCXRQ7Z4W1 244 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 OR6Q1Q8NGQ2 317 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 OR2AJ1Q8NGZ0 328 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 OR2G2Q8NGZ5 317 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 OR5AK2Q8NH90 309 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 MCFD2Q8NI22 146 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SMAP2Q8WU79 429 aaPredicted RBP10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SLC39A7Q92504 469 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 TMEM203Q969S6 136 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 RELTQ969Z4 430 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 NABP1Q96AH0 204 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ZNF845Q96IR2 970 aaPredicted RBP10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 C4orf45Q96LM5 186 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 WDR12Q9GZL7 423 aaKnown RBP10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SLCO5A1Q9H2Y9 848 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 EXO5Q9H790 373 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ELOVL3Q9HB03 270 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 HMG20AQ9NP66 347 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 DDX28Q9NUL7 540 aaKnown RBP10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SLCO1C1Q9NYB5 712 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 LRP12Q9Y561 859 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CSAG2Q9Y5P2 127 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 LIPGQ9Y5X9 500 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 PEX16Q9Y5Y5 336 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 LHFPL6Q9Y693 200 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 R4GMQ9 66 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 FREM2Q5SZK8 3169 aa10.87□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 TRBV5-5A0A0J9YX44 114 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 PNMA8CA0A1B0GUJ8 204 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 OR4C45A6NMZ5 311 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 TAF4O00268 1085 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 MRPL33O75394 65 aaKnown RBP10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SRSF10O75494 262 aaKnown RBP10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 GPANK1O95872 356 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 APOC1P02654 83 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ISG15P05161 165 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 YES1P07947 543 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CST2P09228 141 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CD8BP10966 210 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 RPS19P39019 145 aaKnown RBP10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ETV6P41212 452 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SELENOPP49908 381 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 RPS11P62280 158 aaKnown RBP eCLIP10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 GRB2P62993 217 aaKnown RBP10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SLC3A1Q07837 685 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 DBPQ10586 325 aaPredicted RBP10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 GTF3C1Q12789 2109 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ACSM3Q53FZ2 586 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SOWAHCQ53LP3 525 aaPredicted RBP10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ZMAT1Q5H9K5 638 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CARD17Q5XLA6 110 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 RPTNQ6XPR3 784 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 LRRC69Q6ZNQ3 347 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ABHD12BQ7Z5M8 362 aaPredicted RBP10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 GJC3Q8NFK1 279 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ABHD3Q8WU67 409 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ROBO4Q8WZ75 1007 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 KCTD12Q96CX2 325 aaKnown RBP10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 MAP6Q96JE9 813 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 AMELYQ99218 206 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 HDHD5Q9BXW7 423 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SPRR3Q9UBC9 169 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ATPIF1Q9UII2 106 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 TUBD1Q9UJT1 453 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms