RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 TRAPPC13A5PLN9 417 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 FAM181BA6NEQ2 426 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 CEACAM18A8MTB9 384 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 OPN1SWP03999 348 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 WNT2P09544 360 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 TNFRSF1AP19438 455 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 MRPL19P49406 292 aaKnown RBP14.06□□□□□ -0.16
USE1-208ENST00000600970 DAP3P51398 398 aaKnown RBP14.06□□□□□ -0.16
USE1-208ENST00000600970 ARHGDIAP52565 204 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 FMODQ06828 376 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 ZNF362Q5T0B9 420 aaPredicted RBP14.06□□□□□ -0.16
USE1-208ENST00000600970 BLOC1S3Q6QNY0 202 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 Q6ZR03 302 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 HDDC2Q7Z4H3 204 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 ZER1Q7Z7L7 766 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 OR2Z1Q8NG97 314 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 VANGL1Q8TAA9 524 aaPredicted RBP14.06□□□□□ -0.16
USE1-208ENST00000600970 NSMAFQ92636 917 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 HDAC2Q92769 488 aaKnown RBP14.06□□□□□ -0.16
USE1-208ENST00000600970 NMD3Q96D46 503 aaKnown RBP14.06□□□□□ -0.16
USE1-208ENST00000600970 SPDL1Q96EA4 605 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 MPP4Q96JB8 637 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 C4orf45Q96LM5 186 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 CCT8L2Q96SF2 557 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 PKP2Q99959 881 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 PRSS27Q9BQR3 290 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 SSBP3Q9BWW4 388 aaPredicted RBP14.06□□□□□ -0.16
USE1-208ENST00000600970 OR2H1Q9GZK4 316 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 MMP27Q9H306 513 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 SMURF2Q9HAU4 748 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 ELOVL3Q9HB03 270 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 BEX1Q9HBH7 125 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 INIPQ9NRY2 104 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 CORO2BQ9UQ03 480 aa14.06□□□□□ -0.16
USE1-208ENST00000600970 EVPLLA8MZ36 301 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 M0QX08 132 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 TGDSO95455 350 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 TNFSF4P23510 183 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 MDH2P40926 338 aaKnown RBP14.05□□□□□ -0.16
USE1-208ENST00000600970 RAG2P55895 527 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 STX1BP61266 288 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 TAF11Q15544 211 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 DEFB112Q30KQ8 113 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 ARMC4Q5T2S8 1044 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 FAM27BQ5VT28 67 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 OLFML2AQ68BL7 652 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 ZNF774Q6NX45 483 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 BRICD5Q6PL45 260 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 SLC25A47Q6Q0C1 308 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 BTNL3Q6UXE8 466 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 LRRN1Q6UXK5 716 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 RHOUQ7L0Q8 258 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 PTOV1Q86YD1 416 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 ALDH16A1Q8IZ83 802 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 OR4F5Q8NH21 305 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 ITLN1Q8WWA0 313 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 POFUT1Q9H488 388 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 PRDM13Q9H4Q3 707 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 NANOGQ9H9S0 305 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.05□□□□□ -0.16
USE1-208ENST00000600970 PPP1R3CQ9UQK1 317 aa14.05□□□□□ -0.16
USE1-208ENST00000600970 IGHV2-70DA0A0C4DH43 119 aa14.04□□□□□ -0.16
USE1-208ENST00000600970 SRRM5B3KS81 715 aa14.04□□□□□ -0.16
USE1-208ENST00000600970 TMEM178BH3BS89 294 aa14.04□□□□□ -0.16
USE1-208ENST00000600970 FUT1P19526 365 aa14.04□□□□□ -0.16
USE1-208ENST00000600970 LAP3P28838 519 aa14.04□□□□□ -0.16
USE1-208ENST00000600970 AQP2P41181 271 aa14.04□□□□□ -0.16
USE1-208ENST00000600970 RELBQ01201 579 aa14.04□□□□□ -0.16
USE1-208ENST00000600970 CD47Q08722 323 aa14.04□□□□□ -0.16
USE1-208ENST00000600970 MUC20Q8N307 709 aaPredicted RBP14.04□□□□□ -0.16
USE1-208ENST00000600970 POU5F2Q8N7G0 328 aa14.04□□□□□ -0.16
USE1-208ENST00000600970 MOSPD2Q8NHP6 518 aa14.04□□□□□ -0.16
USE1-208ENST00000600970 DACT3Q96B18 629 aaPredicted RBP14.04□□□□□ -0.16
USE1-208ENST00000600970 CPPED1Q9BRF8 314 aaPredicted RBP14.04□□□□□ -0.16
USE1-208ENST00000600970 PCDHAC1Q9H158 963 aa14.04□□□□□ -0.16
USE1-208ENST00000600970 TNFRSF19Q9NS68 423 aa14.04□□□□□ -0.16
USE1-208ENST00000600970 C1RLQ9NZP8 487 aa14.04□□□□□ -0.16
USE1-208ENST00000600970 CCDC167Q9P0B6 97 aa14.04□□□□□ -0.16
USE1-208ENST00000600970 STX18Q9P2W9 335 aaKnown RBP14.04□□□□□ -0.16
USE1-208ENST00000600970 IL19Q9UHD0 177 aa14.04□□□□□ -0.16
USE1-208ENST00000600970 TMEM120BA0PK00 339 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 M0QZ24 198 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 OR7A10O76100 309 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 MT-ND1P03886 318 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 CRYBA1P05813 215 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 CST2P09228 141 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 KRTAP10-3P60369 221 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 WDR93Q6P2C0 686 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 FIP1L1Q6UN15 594 aaKnown RBP14.03□□□□□ -0.16
USE1-208ENST00000600970 EPGNQ6UW88 154 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 BRD3OSQ6XYD6 125 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 C11orf65Q8NCR3 313 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 OR10S1Q8NGN2 331 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 PFN4Q8NHR9 129 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 RAB40AQ8WXH6 277 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 ZDHHC16Q969W1 377 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 THOC1Q96FV9 657 aaKnown RBP14.03□□□□□ -0.16
USE1-208ENST00000600970 OR2V2Q96R30 315 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 MAN2C1Q9NTJ4 1040 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 TIMM10BQ9Y5J6 103 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms