RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 RERGLQ9H628 205 aa14.93□□□□□ -0.02
SHKBP1-223ENST00000600552 SMURF2Q9HAU4 748 aa14.93□□□□□ -0.02
SHKBP1-223ENST00000600552 G6PC2Q9NQR9 355 aa14.93□□□□□ -0.02
SHKBP1-223ENST00000600552 SAR1AQ9NR31 198 aa14.93□□□□□ -0.02
SHKBP1-223ENST00000600552 ARGLU1Q9NWB6 273 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-223ENST00000600552 A4GNTQ9UNA3 340 aa14.93□□□□□ -0.02
SHKBP1-223ENST00000600552 HIF3AQ9Y2N7 669 aa14.93□□□□□ -0.02
SHKBP1-223ENST00000600552 SNX13Q9Y5W8 968 aa14.93□□□□□ -0.02
SHKBP1-223ENST00000600552 DYSFO75923 2080 aa14.93□□□□□ -0.02
SHKBP1-223ENST00000600552 ELOVL7A1L3X0 281 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 GMNCA6NCL1 334 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 BBIP1A8MTZ0 92 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 GSTA4O15217 222 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 DEAF1O75398 565 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 CST2P09228 141 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 SBK2P0C263 348 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 PCBD1P61457 104 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 SELENOWP63302 87 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 OTPQ5XKR4 325 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 C1orf94Q6P1W5 598 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 OAFQ86UD1 273 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 OR13C2Q8NGS9 318 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 LIPHQ8WWY8 451 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 C4orf45Q96LM5 186 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 PRRC1Q96M27 445 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 SLC6A7Q99884 636 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 TMPRSS13Q9BYE2 586 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 C7orf69Q9H7B7 122 aa14.92□□□□□ -0.02
SHKBP1-223ENST00000600552 A6NIZ1 184 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 TRIM77I1YAP6 450 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 IGF2P01344 180 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 IFNW1P05000 195 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 SCG5P05408 212 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 TSPAN19P0C672 248 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 GPR4P46093 362 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 MMP15P51511 669 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 RAP1BP61224 184 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 RAP1AP62834 184 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 TNFAIP6P98066 277 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 TRAM2Q15035 370 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 COQ5Q5HYK3 327 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 FAM209AQ5JX71 171 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 TBPL2Q6SJ96 375 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 ZNF730Q6ZMV8 503 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 TREML1Q86YW5 311 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 BPIFB2Q8N4F0 458 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 TEX29Q8N6K0 151 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 C3orf56Q8N813 242 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 ST7LQ8TDW4 575 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 RCN3Q96D15 328 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 PLA2G12AQ9BZM1 189 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 VIPAS39Q9H9C1 493 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 ELOVL3Q9HB03 270 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 CYSLTR2Q9NS75 346 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 DCAF16Q9NXF7 216 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 ARMCX1Q9P291 453 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 CAPN7Q9Y6W3 813 aa14.91□□□□□ -0.02
SHKBP1-223ENST00000600552 NPIPB13A6NJU9 1138 aa14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 C12orf71A8MTZ7 269 aa14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 NPIPB4C9JG80 1138 aa14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 ABHD16AO95870 558 aa14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 NPPAP01160 153 aa14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 MSR1P21757 451 aa14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 SLC3A1Q07837 685 aa14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 ENDOGQ14249 297 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 MBNL2Q5VZF2 373 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 ARL9Q6T311 187 aa14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 FKBP9P1Q75LS8 142 aa14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 C1QL2Q7Z5L3 287 aa14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 NANPQ8TBE9 248 aa14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 POFUT1Q9H488 388 aa14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 CMTM6Q9NX76 183 aa14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 GRHPRQ9UBQ7 328 aa14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 ADAM18Q9Y3Q7 739 aa14.9□□□□□ -0.02
SHKBP1-223ENST00000600552 XKRYO14609 159 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 SASH3O75995 380 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 UBOX5O94941 541 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 HTR5AP47898 357 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 SLC9A3P48764 834 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 LIPEQ05469 1076 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 PRKCDQ05655 676 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 MTX3Q5HYI7 312 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 FAM205BPQ63HN1 556 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 CGB2Q6NT52 195 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 RRM2BQ7LG56 351 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 LRRC75AQ8NAA5 344 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 OR2Z1Q8NG97 314 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 FNDC8Q8TC99 324 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 ZFAND2BQ8WV99 257 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 Q96M85 177 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 SUCNR1Q9BXA5 334 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 POLE4Q9NR33 117 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 EGFL7Q9UHF1 273 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 ZDHHC8Q9ULC8 765 aa14.89□□□□□ -0.03
SHKBP1-223ENST00000600552 J3QLI3 93 aa14.88□□□□□ -0.03
SHKBP1-223ENST00000600552 CXCR6O00574 342 aa14.88□□□□□ -0.03
SHKBP1-223ENST00000600552 DOK2O60496 412 aa14.88□□□□□ -0.03
SHKBP1-223ENST00000600552 IGHMP01871 453 aa14.88□□□□□ -0.03
SHKBP1-223ENST00000600552 GSTM3P21266 225 aa14.88□□□□□ -0.03
SHKBP1-223ENST00000600552 LIPAP38571 399 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms