RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 NOX3Q9HBY0 568 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 CLN6Q9NWW5 311 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 CRNNQ9UBG3 495 aaPredicted RBP11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 CYB5R1Q9UHQ9 305 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 LHFPL6Q9Y693 200 aa11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 SPTBN1Q01082 2364 aaKnown RBP11.04□□□□□ -0.64
CHMP2A-206ENST00000600118 A0A1W2PR80 420 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 C12orf71A8MTZ7 269 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 SELENOFO60613 162 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 UBL3O95164 117 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 HLA-DQA2P01906 255 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 PATE4P0C8F1 98 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 CBR1P16152 277 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 ZNF32P17041 273 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 PAX7P23759 505 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 HOXC12P31275 282 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 UBE2NP61088 152 aaKnown RBP11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 PCBD1P61457 104 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 TUBA1BP68363 451 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 TUBA4AP68366 448 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 ADAM8P78325 824 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 ZNF91Q05481 1191 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 AQP6Q13520 282 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 SNTB1Q13884 538 aaKnown RBP11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 PPA1Q15181 289 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 SMN1Q16637 294 aaKnown RBP11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 SLC36A2Q495M3 483 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 SLC18B1Q6NT16 456 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 TUBA1AQ71U36 451 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 OR10H5Q8NGA6 315 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 LINC01560Q8TB33 94 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 NANOS1Q8WY41 292 aaKnown RBP11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 DACH2Q96NX9 599 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 PSMG3-AS1Q96PY0 264 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 ADGRL4Q9HBW9 690 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 MRPS18AQ9NVS2 196 aaKnown RBP11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 ASH2LQ9UBL3 628 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 NDRG3Q9UGV2 375 aa11.03□□□□□ -0.64
CHMP2A-206ENST00000600118 TUBAL3A6NHL2 446 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 SNTNA6NMZ2 147 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 J3QRE1 110 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 ZNF593O00488 134 aaPredicted RBP11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 WNT11O96014 354 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 IGKV3-15P01624 115 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 IGLV1-44P01699 117 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 SBK2P0C263 348 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 CD79AP11912 226 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 ZNF823P16415 610 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 ARR3P36575 388 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 SLC15A1P46059 708 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 MTNR1AP48039 350 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 NUDT6P53370 316 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 RAB1AP62820 205 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 POU4F2Q12837 409 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 GSG1Q2KHT4 349 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 SLC16A9Q7RTY1 509 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 MDP1Q86V88 176 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 ERI1Q8IV48 349 aaKnown RBP11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 MUCL1Q96DR8 90 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 CNN2Q99439 309 aaKnown RBP11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 SPOCK3Q9BQ16 436 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 MED18Q9BUE0 208 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 OR2H1Q9GZK4 316 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 YIPF3Q9GZM5 350 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 WNT5BQ9H1J7 359 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 KCNN2Q9H2S1 579 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 Q9H521 79 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 MOV10Q9HCE1 1003 aaKnown RBP11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 PLCXD1Q9NUJ7 323 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 NPAP1Q9NZP6 1156 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 RPL36Q9Y3U8 105 aaKnown RBP11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 LRRC42Q9Y546 428 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 TIMM10BQ9Y5J6 103 aa11.02□□□□□ -0.65
CHMP2A-206ENST00000600118 CACNA1CQ13936 2221 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 FASNP49327 2511 aaKnown RBP11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 PRSS44E7EML9 344 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 MRPL3P09001 348 aaKnown RBP11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 DBTP11182 482 aaKnown RBP11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 NAA10P41227 235 aaPredicted RBP11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 RPS27P42677 84 aaKnown RBP11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 CAPZA2P47755 286 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 CXCR4P61073 352 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 PSG4Q00888 419 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 PIGFQ07326 219 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 SCRN3Q0VDG4 424 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 C3orf36Q3SXR2 165 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 CCDC92Q53HC0 331 aaPredicted RBP11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 PABPC1L2AQ5JQF8 200 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 C6orf141Q5SZD1 244 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 TMEM53Q6P2H8 277 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 CORO6Q6QEF8 472 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 CFAP77Q6ZQR2 320 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 SHFQ7M4L6 423 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 DPY19L4Q7Z388 723 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 CDC20BQ86Y33 519 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 ZNF584Q8IVC4 421 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 LINC00346Q8IVM7 164 aa11.01□□□□□ -0.65
CHMP2A-206ENST00000600118 ZNF454Q8N9F8 522 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms