RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223		A0A1W2PRG6	482 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	IGHV1-46	P01743	117 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	IGHV3-13	P01766	116 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	MT-ND1	P03886	318 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	HIST1H2AB	P04908	130 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	TSPAN19	P0C672	248 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	CCNO	P22674	350 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	GSK3B	P49841	420 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	MMP15	P51511	669 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	ZNF84	P51523	738 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	MRPS34	P82930	218 aa	Known RBP	12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	HSF2	Q03933	536 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	RCN1	Q15293	331 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	CCDC80	Q76M96	950 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	HIST3H2A	Q7L7L0	130 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	SLC30A8	Q8IWU4	369 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	AKR7L	Q8NHP1	331 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	C11orf40	Q8WZ69	217 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	HIST1H2AC	Q93077	130 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	POM121L2	Q96KW2	1035 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	SLC6A7	Q99884	636 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	BCL2L14	Q9BZR8	327 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	SAP30L	Q9HAJ7	183 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	ESM1	Q9NQ30	184 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	INIP	Q9NRY2	104 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	DCAF16	Q9NXF7	216 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	SH3GLB1	Q9Y371	365 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	SNX13	Q9Y5W8	968 aa		12.46	□□□□□ -0.41
IRF3-223	ENST00000599223	IQCM	A0A1B0GVH7	501 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	CLDN25	C9JDP6	229 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	WIPF1	O43516	503 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	SPRY3	O43610	288 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	FSHB	P01225	129 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	STOM	P27105	288 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	APLNR	P35414	380 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	RAD52	P43351	418 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	COMP	P49747	757 aa	Predicted RBP	12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	DAP3	P51398	398 aa	Known RBP	12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	TAS2R41	P59536	307 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	SELENOV	P59797	346 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	ERVK-25	P63136	954 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	PLP2	Q04941	152 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	TOP3A	Q13472	1001 aa	Predicted RBP	12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	PIN1	Q13526	163 aa	Predicted RBP	12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	MTX3	Q5HYI7	312 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	ACSM5	Q6NUN0	579 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	C1QL2	Q7Z5L3	287 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	PEG10	Q86TG7	708 aa	Known RBP	12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	CALHM3	Q86XJ0	350 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	FAM156A	Q8NDB6	213 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	OR2T12	Q8NG77	320 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	OR1J2	Q8NGS2	313 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	ZNF418	Q8TF45	676 aa	Predicted RBP	12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	NSMAF	Q92636	917 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	RAB39B	Q96DA2	213 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	SGTB	Q96EQ0	304 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	MARS2	Q96GW9	593 aa	Known RBP	12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	S100A14	Q9HCY8	104 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	ACTR3B	Q9P1U1	418 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	OPN4	Q9UHM6	478 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	GPR160	Q9UJ42	338 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	PCDHB10	Q9UN67	800 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	PKD1L1	Q8TDX9	2849 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223	TRRAP	Q9Y4A5	3859 aa		12.45	□□□□□ -0.42
IRF3-223	ENST00000599223		A0A0G2JMP0	313 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223		A0A0X1KG70	313 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	TMEM89	A2RUT3	159 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	C5orf49	A4QMS7	147 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	AQP12B	A6NM10	295 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	CENPBD1	B2RD01	187 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	TPD52L2	O43399	206 aa	Known RBP	12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	KRT36	O76013	467 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	OR5F1	O95221	314 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	BAG2	O95816	211 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	MSX2	P35548	267 aa	Predicted RBP	12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	RBM34	P42696	430 aa	Known RBP	12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	OR1E2	P47887	323 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	ZNF81	P51508	661 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	PSG4	Q00888	419 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	CD47	Q08722	323 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	THEM4	Q5T1C6	240 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	INTS11	Q5TA45	600 aa	Known RBP	12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	ERICH5	Q6P6B1	374 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	SLC25A47	Q6Q0C1	308 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	USP43	Q70EL4	1123 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	AQP12A	Q8IXF9	295 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	OR4M2	Q8NGB6	313 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	SLC25A40	Q8TBP6	338 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	FAM216A	Q8WUB2	273 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	TMEM239	Q8WW34	195 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	GEMIN6	Q8WXD5	167 aa	Known RBP	12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	NSMCE2	Q96MF7	247 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	OR2J1	Q9GZK6	312 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	WNT5B	Q9H1J7	359 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	VCX3B	Q9H321	246 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	SIAE	Q9HAT2	523 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	DECR2	Q9NUI1	292 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	STX18	Q9P2W9	335 aa	Known RBP	12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	RIMS3	Q9UJD0	308 aa		12.44	□□□□□ -0.42
IRF3-223	ENST00000599223	ELOVL7	A1L3X0	281 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms