RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 SSX8Q7RTT4 187 aa17.58■□□□□ 0.41
IRF3-221ENST00000598808 ADCK1Q86TW2 530 aa17.58■□□□□ 0.41
IRF3-221ENST00000598808 OR8D4Q8NGM9 314 aa17.58■□□□□ 0.41
IRF3-221ENST00000598808 FNDC8Q8TC99 324 aa17.58■□□□□ 0.41
IRF3-221ENST00000598808 NANOS1Q8WY41 292 aaKnown RBP17.58■□□□□ 0.41
IRF3-221ENST00000598808 TMIGD2Q96BF3 282 aa17.58■□□□□ 0.41
IRF3-221ENST00000598808 DOK1Q99704 481 aa17.58■□□□□ 0.41
IRF3-221ENST00000598808 SYT4Q9H2B2 425 aa17.58■□□□□ 0.41
IRF3-221ENST00000598808 NELFAQ9H3P2 528 aa17.58■□□□□ 0.41
IRF3-221ENST00000598808 SEC61A2Q9H9S3 476 aa17.58■□□□□ 0.41
IRF3-221ENST00000598808 TMEM38BQ9NVV0 291 aa17.58■□□□□ 0.41
IRF3-221ENST00000598808 BAIAP2Q9UQB8 552 aa17.58■□□□□ 0.41
IRF3-221ENST00000598808 DEFB108AA8MXU0 73 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 CTAG2O75638 210 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 RENP00797 406 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 CDAP32320 146 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 GUCA1AP43080 201 aaPredicted RBP17.57■□□□□ 0.4
IRF3-221ENST00000598808 SLC15A1P46059 708 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 SGCAQ16586 387 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 HIST3H3Q16695 136 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 SYT6Q5T7P8 510 aaPredicted RBP17.57■□□□□ 0.4
IRF3-221ENST00000598808 RNLSQ5VYX0 342 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 AHSA2Q719I0 299 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 IQCF1Q8N6M8 205 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 SDR9C7Q8NEX9 313 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 OR2T33Q8NG76 320 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 TMEM163Q8TC26 289 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 GGHQ92820 318 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 OBP2BQ9NPH6 170 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 TVP23BQ9NYZ1 205 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 NPAP1Q9NZP6 1156 aa17.57■□□□□ 0.4
IRF3-221ENST00000598808 IGKV1D-43A0A0B4J1Z2 117 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 SLC22A23A1A5C7 686 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 SIAH2O43255 324 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 HLA-HP01893 362 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 HRGP04196 525 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 HIST1H1CP16403 213 aaKnown RBP17.56■□□□□ 0.4
IRF3-221ENST00000598808 GSTT1P30711 240 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 PIGFQ07326 219 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 BSPH1Q075Z2 132 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 SNAPC1Q16533 368 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 UBE2UQ5VVX9 321 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 CLVS1Q8IUQ0 354 aaPredicted RBP17.56■□□□□ 0.4
IRF3-221ENST00000598808 LRRC18Q8N456 261 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 STX19Q8N4C7 294 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 SLC22A24Q8N4F4 322 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 OR52E2Q8NGJ4 325 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 FOXN4Q96NZ1 517 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 NMNAT3Q96T66 252 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 MYCBPQ99417 103 aaPredicted RBP17.56■□□□□ 0.4
IRF3-221ENST00000598808 SH3GL3Q99963 347 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 CDCA4Q9BXL8 241 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 YIPF3Q9GZM5 350 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 ACOT13Q9NPJ3 140 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 LRBAP50851 2863 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 IMPA2O14732 288 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 SLC16A7O60669 478 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 MT-ND2P03891 347 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 CD3EP07766 207 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 OR8G3PP0DMU2 310 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 APEHP13798 732 aaKnown RBP17.56■□□□□ 0.4
IRF3-221ENST00000598808 GRK5P34947 590 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 CDKN2AP42771 156 aaKnown RBP17.56■□□□□ 0.4
IRF3-221ENST00000598808 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.56■□□□□ 0.4
IRF3-221ENST00000598808 C10orf128Q5T292 105 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 SLC25A47Q6Q0C1 308 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 TMEM108Q6UXF1 575 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 TCEANCQ8N8B7 351 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 RAB2BQ8WUD1 216 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 SGCDQ92629 289 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 RFKQ969G6 155 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 ISOC1Q96CN7 298 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 HS3ST6Q96QI5 342 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 RACGAP1Q9H0H5 632 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 FN3KQ9H479 309 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 RNF121Q9H920 327 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 AASSQ9UDR5 926 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 APCP25054 2843 aa17.56■□□□□ 0.4
IRF3-221ENST00000598808 CSMD1Q96PZ7 3565 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 ARPC4-TTLL3A0A0A6YYG9 625 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 BHLHE40O14503 412 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 ARPC3O15145 178 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 GOSR1O95249 250 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 RAB36O95755 333 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 TXNDC12O95881 172 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 PGGHGQ32M88 737 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 ACSM5Q6NUN0 579 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 ADAM5Q6NVV9 412 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 DNM1P34Q6PK57 102 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 SLC16A14Q7RTX9 510 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.55■□□□□ 0.4
IRF3-221ENST00000598808 MDP1Q86V88 176 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 OR4Q3Q8NH05 313 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 OTULINQ96BN8 352 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 PLEKHA8Q96JA3 519 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 KCNS3Q9BQ31 491 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 KCNN2Q9H2S1 579 aa17.55■□□□□ 0.4
IRF3-221ENST00000598808 RPRD1BQ9NQG5 326 aaKnown RBP17.55■□□□□ 0.4
IRF3-221ENST00000598808 MRPS18AQ9NVS2 196 aaKnown RBP17.55■□□□□ 0.4
IRF3-221ENST00000598808 PRR14LQ5THK1 2151 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms