RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 ACAA2P42765 397 aaKnown RBP13.9□□□□□ -0.18
PNKP-204ENST00000594661 H2BFSP57053 126 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 ACY1Q03154 408 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 ELAVL1Q15717 326 aaKnown RBP13.9□□□□□ -0.18
PNKP-204ENST00000594661 NSDHLQ15738 373 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 NDUFAF6Q330K2 333 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 RHBDD2Q6NTF9 364 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 PLBD1Q6P4A8 553 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 SHISA6Q6ZSJ9 500 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 LNX2Q8N448 690 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 IFI44Q8TCB0 444 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 ASB13Q8WXK3 278 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 NAT6Q93015 286 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 C14orf144Q96I85 54 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 NXF5Q9H1B4 397 aaKnown RBP13.9□□□□□ -0.18
PNKP-204ENST00000594661 SMOC1Q9H4F8 434 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 MKKSQ9NPJ1 570 aaPredicted RBP13.9□□□□□ -0.18
PNKP-204ENST00000594661 BHLHE40O14503 412 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 RCBTB2O95199 551 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 AGAP20933 346 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 TBXA2RP21731 343 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 ABCD3P28288 659 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 OR10A3P58181 314 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 BLOC1S1P78537 153 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.89□□□□□ -0.19
PNKP-204ENST00000594661 TMPRSS11FQ6ZWK6 438 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 OR2W3Q7Z3T1 314 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 STK35Q8TDR2 534 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 SPRYD4Q8WW59 207 aaPredicted RBP13.89□□□□□ -0.19
PNKP-204ENST00000594661 SLC46A1Q96NT5 459 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 NUDT9Q9BW91 350 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 TMPRSS5Q9H3S3 457 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 MEPEQ9NQ76 525 aaPredicted RBP13.89□□□□□ -0.19
PNKP-204ENST00000594661 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.89□□□□□ -0.19
PNKP-204ENST00000594661 FBXO4Q9UKT5 387 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 PCDHB10Q9UN67 800 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 SRPK3Q9UPE1 567 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 RCE1Q9Y256 329 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 EXOGQ9Y2C4 368 aaKnown RBP13.89□□□□□ -0.19
PNKP-204ENST00000594661 BDP1A6H8Y1 2624 aa13.89□□□□□ -0.19
PNKP-204ENST00000594661 F5H5P2 479 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 KRT33AO76009 404 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 CER1O95813 267 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 IFNGP01579 166 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 IGHA1P01876 353 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 HCCSP53701 268 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 ALKBH1Q13686 389 aaKnown RBP13.88□□□□□ -0.19
PNKP-204ENST00000594661 MPPED2Q15777 294 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 OLFML2AQ68BL7 652 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 PWWP2BQ6NUJ5 590 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 RPL13AP3Q6NVV1 102 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 THSD4Q6ZMP0 1018 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 LANCL3Q6ZV70 420 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 SPSB2Q99619 263 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 JAM3Q9BX67 310 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 SEC11CQ9BY50 192 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 TLNRD1Q9H1K6 362 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 AUNIPQ9H7T9 357 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 MED20Q9H944 212 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 COL5A1P20908 1838 aaPredicted RBP13.88□□□□□ -0.19
PNKP-204ENST00000594661 TRAV27A0A087WT01 109 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 E9PI62 339 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 ZNF35P13682 527 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 PPICP45877 212 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 HTR5AP47898 357 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 RAB4BP61018 213 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 CXADRP78310 365 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 CHAF1BQ13112 559 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 SSX2Q16385 188 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 ALG10BQ5I7T1 473 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 SLC23A3Q6PIS1 610 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 RABEPKQ7Z6M1 372 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 GID4Q8IVV7 300 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 C15orf54Q8N8G6 183 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 OR5M1Q8NGP8 315 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 OR1S2Q8NGQ3 325 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 OR51A7Q8NH64 312 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 NEU1Q99519 415 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 TRIM2Q9C040 744 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 LHX6Q9UPM6 363 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 SIGLEC7Q9Y286 467 aa13.88□□□□□ -0.19
PNKP-204ENST00000594661 ASCC3Q8N3C0 2202 aaKnown RBP13.88□□□□□ -0.19
PNKP-204ENST00000594661 A0A0D9SG52 128 aa13.87□□□□□ -0.19
PNKP-204ENST00000594661 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.87□□□□□ -0.19
PNKP-204ENST00000594661 SERINC4A6NH21 518 aa13.87□□□□□ -0.19
PNKP-204ENST00000594661 RCC1P18754 421 aaPredicted RBP13.87□□□□□ -0.19
PNKP-204ENST00000594661 ANXA7P20073 488 aaKnown RBP13.87□□□□□ -0.19
PNKP-204ENST00000594661 ACHEP22303 614 aa13.87□□□□□ -0.19
PNKP-204ENST00000594661 BDKRB2P30411 391 aa13.87□□□□□ -0.19
PNKP-204ENST00000594661 AP3S2P59780 193 aa13.87□□□□□ -0.19
PNKP-204ENST00000594661 RNF4P78317 190 aa13.87□□□□□ -0.19
PNKP-204ENST00000594661 ZNF791Q3KP31 576 aaPredicted RBP13.87□□□□□ -0.19
PNKP-204ENST00000594661 NIPAL3Q6P499 406 aa13.87□□□□□ -0.19
PNKP-204ENST00000594661 ZNF322Q6U7Q0 402 aaPredicted RBP13.87□□□□□ -0.19
PNKP-204ENST00000594661 C9orf40Q8IXQ3 194 aa13.87□□□□□ -0.19
PNKP-204ENST00000594661 WDFY3Q8IZQ1 3526 aa13.87□□□□□ -0.19
PNKP-204ENST00000594661 ZNF561Q8N587 486 aa13.87□□□□□ -0.19
PNKP-204ENST00000594661 SIRT6Q8N6T7 355 aa13.87□□□□□ -0.19
PNKP-204ENST00000594661 POMGNT2Q8NAT1 580 aa13.87□□□□□ -0.19
PNKP-204ENST00000594661 OR51G2Q8NGK0 314 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms