RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 B9D1Q9UPM9 204 aa11.75□□□□□ -0.53
VRK3-205ENST00000593919 IGLV1-36A0A0B4J1U3 117 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 NPIPA2E9PIF3 369 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 NPIPA3F8WFD2 350 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 GPANK1O95872 356 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 ACTL6AO96019 429 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 PGA4P0DJD7 388 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 PGA3P0DJD8 388 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 GALP22466 123 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 EIF2B2P49770 351 aaKnown RBP11.74□□□□□ -0.53
VRK3-205ENST00000593919 CLDN17P56750 224 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 TMPRSS3P57727 454 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 TAS2R43P59537 309 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 FAM27D1Q5T7N8 215 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 ABLIM2Q6H8Q1 611 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 Q6ZS92 163 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 CREB3L2Q70SY1 520 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 SLC35F2Q8IXU6 374 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 MEIOBQ8N635 442 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 RBMXL3Q8N7X1 1067 aaKnown RBP11.74□□□□□ -0.53
VRK3-205ENST00000593919 OR6X1Q8NH79 312 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 EXTL1Q92935 676 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 SLC25A44Q96H78 314 aaPredicted RBP11.74□□□□□ -0.53
VRK3-205ENST00000593919 FOXN4Q96NZ1 517 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 ZNF385AQ96PM9 386 aaKnown RBP11.74□□□□□ -0.53
VRK3-205ENST00000593919 SPRR3Q9UBC9 169 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 MED12LQ86YW9 2145 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 NCOA6Q14686 2063 aaPredicted RBP11.74□□□□□ -0.53
VRK3-205ENST00000593919 IGKV1D-43A0A0B4J1Z2 117 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 TVP23AA6NH52 213 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 PLPP2O43688 288 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 IGHG1P01857 330 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 GAAP10253 952 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 CRABP1P29762 137 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 PLA2G5P39877 138 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 C3AR1Q16581 482 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 TBR1Q16650 682 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 CNIH2Q6PI25 160 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 HDDC2Q7Z4H3 204 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 ZBTB8BQ8NAP8 495 aaPredicted RBP11.74□□□□□ -0.53
VRK3-205ENST00000593919 NOXO1Q8NFA2 376 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 SETD6Q8TBK2 473 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 ABHD17AQ96GS6 310 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 TAAR6Q96RI8 345 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 SF3B5Q9BWJ5 86 aaKnown RBP11.74□□□□□ -0.53
VRK3-205ENST00000593919 PCDHGB7Q9Y5F8 929 aa11.74□□□□□ -0.53
VRK3-205ENST00000593919 ZNF716A6NP11 495 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 IGHG3P01860 377 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 MTNR1BP49286 362 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 UCNP55089 124 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 CLRN1P58418 232 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 CBX3Q13185 183 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 BCL2A1Q16548 175 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 IDNKQ5T6J7 187 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 CARD17Q5XLA6 110 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 MZT2AQ6P582 158 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 PLXDC2Q6UX71 529 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 FCRLAQ7L513 359 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 NRARPQ7Z6K4 114 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 TIGD4Q8IY51 512 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 OR13C5Q8NGS8 318 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 NEDD4LQ96PU5 975 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 PPIL3Q9H2H8 161 aaKnown RBP11.73□□□□□ -0.53
VRK3-205ENST00000593919 WDR76Q9H967 626 aa11.73□□□□□ -0.53
VRK3-205ENST00000593919 ZNF726A6NNF4 738 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 C1QTNF9BB2RNN3 333 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 WISP2O76076 250 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 HLA-DQA2P01906 255 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 CSF3P09919 207 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 OR2T7P0C7T2 308 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 C1QTNF9P0C862 333 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 MYL9P24844 172 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 CENPAP49450 140 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 GLO1Q04760 184 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 SCN1BQ07699 218 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 CEACAM19Q7Z692 300 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 NR2C2APQ86WQ0 139 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 GDPD1Q8N9F7 314 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 ZIC4Q8N9L1 334 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 OR2T27Q8NH04 317 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 ABHD4Q8TB40 342 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 ABHD3Q8WU67 409 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 PGLYRP3Q96LB9 341 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 ADAD1Q96M93 576 aaKnown RBP11.72□□□□□ -0.53
VRK3-205ENST00000593919 ST6GALNAC2Q9UJ37 374 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 GNG8Q9UK08 70 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 COPS3Q9UNS2 423 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 TP53TG5Q9Y2B4 290 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 COA3Q9Y2R0 106 aaPredicted RBP11.72□□□□□ -0.53
VRK3-205ENST00000593919 FLVCR1Q9Y5Y0 555 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 FAM25AB3EWG3 89 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 FAM25CB3EWG5 89 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 FAM25GB3EWG6 89 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 CYTIPO60759 359 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 APEX1P27695 318 aaKnown RBP11.72□□□□□ -0.53
VRK3-205ENST00000593919 RPS27P42677 84 aaKnown RBP11.72□□□□□ -0.53
VRK3-205ENST00000593919 RFX2P48378 723 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 TPTEP56180 551 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 ACTA2P62736 377 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 ACTG2P63267 376 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms