RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 HOXC5Q00444 222 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 LGALS3BPQ08380 585 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 COX10Q12887 443 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 RIN1Q13671 783 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 GSG1Q2KHT4 349 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 ZNF613Q6PF04 617 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 MDP1Q86V88 176 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 UEVLDQ8IX04 471 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 CDK20Q8IZL9 346 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 RNF113BQ8IZP6 322 aaKnown RBP8.13□□□□□ -1.11
BRCA1-226ENST00000591534 ADPRHL1Q8NDY3 354 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 RDH5Q92781 318 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 MRPL24Q96A35 216 aaKnown RBP8.13□□□□□ -1.11
BRCA1-226ENST00000591534 MPP4Q96JB8 637 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 LRR1Q96L50 414 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 PRRC1Q96M27 445 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 JMJD8Q96S16 334 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 ZNF184Q99676 751 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-226ENST00000591534 WFDC6Q9BQY6 131 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 FNDC11Q9BVV2 318 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 ZNF416Q9BWM5 594 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 PRRG3Q9BZD7 231 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 NOX3Q9HBY0 568 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 KIF17Q9P2E2 1029 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 SH3GLB1Q9Y371 365 aa8.13□□□□□ -1.11
BRCA1-226ENST00000591534 A0A1W2PRQ8 180 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 SLC22A23A1A5C7 686 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 PRSS23O95084 383 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 UBL3O95164 117 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 OR5F1O95221 314 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 H1F0P07305 194 aaKnown RBP8.12□□□□□ -1.11
BRCA1-226ENST00000591534 GSTM3P21266 225 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 ACHEP22303 614 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 GLRXP35754 106 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 HMGA2P52926 109 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 TAS2R41P59536 307 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 MRPS11P82912 194 aaKnown RBP8.12□□□□□ -1.11
BRCA1-226ENST00000591534 SRSF2Q01130 221 aaKnown RBP8.12□□□□□ -1.11
BRCA1-226ENST00000591534 RUNX1T1Q06455 604 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 DGCR6Q14129 220 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 OGFRL1Q5TC84 451 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-226ENST00000591534 TTC23Q5W5X9 447 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 KRT80Q6KB66 452 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 ULK3Q6PHR2 472 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 DEF8Q6ZN54 512 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 LINGO2Q7L985 606 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 KDM8Q8N371 416 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 LSMEM1Q8N8F7 131 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 SCAIQ8N9R8 606 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 OR6N1Q8NGY5 312 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 OR6S1Q8NH40 331 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 OR51F2Q8NH61 342 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 CHAC2Q8WUX2 184 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 TAMM41Q96BW9 452 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 KTI12Q96EK9 354 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-226ENST00000591534 OR2M2Q96R28 347 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 PTDSS2Q9BVG9 487 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 NELFAQ9H3P2 528 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 RAB26Q9ULW5 256 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 TMEM5Q9Y2B1 443 aa8.12□□□□□ -1.11
BRCA1-226ENST00000591534 SAMHD1Q9Y3Z3 626 aaKnown RBP8.12□□□□□ -1.11
BRCA1-226ENST00000591534 TMEM129A0AVI4 362 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 H3BNX3 289 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 TNFRSF11BO00300 401 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 TPST1O60507 370 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 TIPRLO75663 272 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 GADD45GO95257 159 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 IGF2P01344 180 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 MT-ND5P03915 603 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 MSMBP08118 114 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 CELA3BP08861 270 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 SAGP10523 405 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-226ENST00000591534 GRPRP30550 384 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 RBM34P42696 430 aaKnown RBP8.11□□□□□ -1.11
BRCA1-226ENST00000591534 ALDH3A2P51648 485 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 ACTG1P63261 375 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 PMS2P3Q13401 168 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 IKZF1Q13422 519 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 IL18R1Q13478 541 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 CAMK2DQ13557 499 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 TRAM2Q15035 370 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 NPTX1Q15818 432 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 MOGQ16653 247 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 MSMPQ1L6U9 139 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 ANKDD1AQ495B1 522 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 ALG10BQ5I7T1 473 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 RPL13AP3Q6NVV1 102 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 ZNF813Q6ZN06 617 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 DPPA2Q7Z7J5 298 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 CARM1Q86X55 608 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 C20orf196Q8IYI0 205 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 OFCC1Q8IZS5 231 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 ZCCHC24Q8N2G6 241 aaKnown RBP8.11□□□□□ -1.11
BRCA1-226ENST00000591534 ZNF555Q8NEP9 628 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 SGMS2Q8NHU3 365 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 TAAR8Q969N4 342 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 TMEM186Q96B77 213 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 SOX7Q9BT81 388 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 ULBP2Q9BZM5 246 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 SLC19A3Q9BZV2 496 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms