RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 OR10X1Q8NGY0 326 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 OR52N5Q8NH56 324 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 DOK4Q8TEW6 326 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 NAT14Q8WUY8 206 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 SNAPC3Q92966 411 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 CCDC106Q9BWC9 280 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 ATG5Q9H1Y0 275 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 APMAPQ9HDC9 416 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 B3GNT2Q9NY97 397 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 DKK4Q9UBT3 224 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 SF3B6Q9Y3B4 125 aaKnown RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 COL11A1P12107 1806 aaPredicted RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 OTOFQ9HC10 1997 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 HAX1O00165 279 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 FUT6P51993 359 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 GABRA6Q16445 453 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 CTU2Q2VPK5 515 aaKnown RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 CCDC58Q4VC31 144 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 ASRGL1Q7L266 308 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 GALNT10Q86SR1 603 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 NTNG2Q96CW9 530 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 MBOAT4Q96T53 435 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 DPAGT1Q9H3H5 408 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 HES4Q9HCC6 221 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 GAR1Q9NY12 217 aaKnown RBP5.67□□□□□ -1.5
SMAD4-212ENST00000591126 MIOXQ9UGB7 285 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 OR14J1Q9UGF5 321 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 ZMIZ1Q9ULJ6 1067 aa5.67□□□□□ -1.5
SMAD4-212ENST00000591126 AQP7P3A6NL99 342 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 SOCS6O14544 535 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 GDF9O60383 454 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 EPPINO95925 133 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 IFNA5P01569 189 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 DBHP09172 617 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 ACP2P11117 423 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 RPS2P15880 293 aaKnown RBP5.66□□□□□ -1.5
SMAD4-212ENST00000591126 GUCA2AQ02747 115 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 UNQ9370/PRO34162Q6UXP9 181 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 OR6V1Q8N148 313 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 SCGB1C1Q8TD33 95 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 SPSB1Q96BD6 273 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 EGLN2Q96KS0 407 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 PKP2Q99959 881 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 BEX2Q9BXY8 128 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 TAS2R1Q9NYW7 299 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 TAAR3PQ9P1P4 343 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 NUP50Q9UKX7 468 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 ZNF281Q9Y2X9 895 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 HS3ST3B1Q9Y662 390 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 TRIP12Q14669 1992 aaPredicted RBP5.66□□□□□ -1.5
SMAD4-212ENST00000591126 A0A087WUJ7 227 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 PRSS37A4D1T9 235 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 SLC35F4A4IF30 521 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 COX6A1P12074 109 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 CSRP3P50461 194 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 AKR1C2P52895 323 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 EDDM3BP56851 147 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 CXCR4P61073 352 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 CEACAM19Q7Z692 300 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 TMEM251Q8N6I4 163 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 PRO3102Q9H379 93 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 METTL8Q9H825 291 aaKnown RBP5.66□□□□□ -1.5
SMAD4-212ENST00000591126 SAP30LQ9HAJ7 183 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 FAM240BA0A1B0GVZ2 78 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 NAP1L6A6NFF2 107 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 CD8B2A6NJW9 211 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 ORC5O43913 435 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 SHOX2O60902 331 aaPredicted RBP5.66□□□□□ -1.5
SMAD4-212ENST00000591126 ETV4P43268 484 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 CD97P48960 835 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 CX3CR1P49238 355 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 METTL11BQ5VVY1 283 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 MRM1Q6IN84 353 aaKnown RBP5.66□□□□□ -1.5
SMAD4-212ENST00000591126 DPY19L2P1Q6NXN4 242 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 ARSKQ6UWY0 536 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 PPP1R32Q7Z5V6 425 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 STOML3Q8TAV4 291 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 RAB40AQ8WXH6 277 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 ROBO4Q8WZ75 1007 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 KIRREL1Q96J84 757 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 CNTNAP3BQ96NU0 1288 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 TSSK2Q96PF2 358 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 FEVQ99581 238 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 EGLN3Q9H6Z9 239 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 ZNF355PQ9NSJ1 428 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 OR6C3Q9NZP0 311 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 THYN1Q9P016 225 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 FOXJ2Q9P0K8 574 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 OSGIN1Q9UJX0 560 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 OAZ3Q9UMX2 235 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 PDE4DIPQ5VU43 2346 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 OR2M5A3KFT3 312 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 B8ZZF3 427 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 SNCAP37840 140 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 CYCSP99999 105 aaKnown RBP5.66□□□□□ -1.5
SMAD4-212ENST00000591126 YIF1BQ5BJH7 314 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 C9orf152Q5JTZ5 239 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 FAM209BQ5JX69 171 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 GPR157Q5UAW9 335 aa5.66□□□□□ -1.5
SMAD4-212ENST00000591126 FAM198BQ6UWH4 519 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms