RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 ADAM10O14672 748 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 COCHO43405 550 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 ADAP1O75689 374 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 OR13C7P0DN81 318 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 AKR1C4P17516 323 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 HLA-GP17693 338 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 CSRP1P21291 193 aaKnown RBP6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 MAS1LP35410 378 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 APLNRP35414 380 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 THPOP40225 353 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 ACTBP60709 375 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 HNRNPKP61978 463 aaKnown RBP eCLIP6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 ACTG1P63261 375 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 RHEBQ15382 184 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 OXLD1Q5BKU9 147 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 DNLZQ5SXM8 178 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 CST9Q5W186 159 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 ZNF343Q6P1L6 599 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 C5orf24Q7Z6I8 188 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 SLC25A42Q86VD7 318 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 RANBP3LQ86VV4 465 aaPredicted RBP6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 PRSS58Q8IYP2 241 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 CDK20Q8IZL9 346 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 ZNF664Q8N3J9 261 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 ADAD2Q8NCV1 583 aaKnown RBP6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 OR4S1Q8NGB4 309 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 SVIPQ8NHG7 77 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 MITD1Q8WV92 249 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 SEH1LQ96EE3 360 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 IL17FQ96PD4 163 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 LGR4Q9BXB1 951 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 EIF5A2Q9GZV4 153 aaKnown RBP6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 TWSG1Q9GZX9 223 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 PRODH2Q9UF12 536 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 SIGLEC7Q9Y286 467 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 GOLT1BQ9Y3E0 138 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 MDC1Q14676 2089 aaKnown RBP6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 NUP210LQ5VU65 1888 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 A0A1W2PS29 197 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 TBC1D3BA6NDS4 549 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 SLC38A8A6NNN8 435 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 ZNF736B4DX44 427 aaPredicted RBP6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 NME2P1O60361 137 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 SRPX2O60687 465 aaPredicted RBP6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 TBX19O60806 448 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 C1orf105O95561 183 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 TSPAN15O95858 294 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 GPANK1O95872 356 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 CD1AP06126 327 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 THBS1P07996 1170 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 CXCL1P09341 107 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 NPSP0C0P6 89 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 TBC1D3HP0C7X1 549 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 OR8G3PP0DMU2 310 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 LSSP48449 732 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 SPINT3P49223 89 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 SULT1A2P50226 295 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 PDX1P52945 283 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 NKX6-1P78426 367 aaPredicted RBP6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 DUSP2Q05923 314 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 GUK1Q16774 197 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 Q499Y3 187 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 TBC1D3GQ6DHY5 549 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 OR4C11Q6IEV9 310 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 FOXRED2Q8IWF2 684 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 CCDC116Q8IYX3 515 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 TMEM239Q8WW34 195 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 LCN9Q8WX39 176 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 RAB24Q969Q5 203 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 BSCL2Q96G97 398 aaPredicted RBP6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 PACRGQ96M98 296 aaPredicted RBP6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 WDR92Q96MX6 357 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 LMF1Q96S06 567 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 NRTNQ99748 197 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 CWH43Q9H720 699 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 FAM86C1Q9NVL1 165 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 USP36Q9P275 1121 aaKnown RBP6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 PLAGL1Q9UM63 463 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 FLVCR1Q9Y5Y0 555 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 PUS1Q9Y606 427 aaKnown RBP eCLIP6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 POMT1Q9Y6A1 747 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 URGCP-MRPS24S4R325 110 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 TRBV6-7A0A0A0MS04 114 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 A0A1W2PPC1 479 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 FEZF1A0PJY2 475 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 ZNF724A8MTY0 619 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 STATHP02808 62 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 SERPINA4P29622 427 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 HOXC8P31273 242 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 PBX2P40425 430 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 DHPSP49366 369 aaPredicted RBP6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 TAS2R38P59533 333 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 CD81P60033 236 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 C2orf76Q3KRA6 126 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 RNASE10Q5GAN6 216 aaKnown RBP6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 AKR1C8PQ5T2L2 129 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 OR2T2Q6IF00 324 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 GLB1LQ6UWU2 654 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 TRAPPC5Q8IUR0 188 aa6.99□□□□□ -1.29
NEDD4L-229ENST00000590506 OR6K6Q8NGW6 343 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms