RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 SRSF10O75494 262 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-209ENST00000589838 MPZL1O95297 269 aa17.15■□□□□ 0.34
PRKCSH-209ENST00000589838 ST3GAL2Q16842 350 aa17.15■□□□□ 0.34
PRKCSH-209ENST00000589838 C3orf33Q6P1S2 294 aa17.15■□□□□ 0.34
PRKCSH-209ENST00000589838 CREB3L2Q70SY1 520 aa17.15■□□□□ 0.34
PRKCSH-209ENST00000589838 OR10G3Q8NGC4 313 aa17.15■□□□□ 0.34
PRKCSH-209ENST00000589838 GCDHQ92947 438 aaPredicted RBP17.15■□□□□ 0.34
PRKCSH-209ENST00000589838 SPACA9Q96E40 222 aaPredicted RBP17.15■□□□□ 0.34
PRKCSH-209ENST00000589838 APMAPQ9HDC9 416 aa17.15■□□□□ 0.34
PRKCSH-209ENST00000589838 OCIAD1Q9NX40 245 aa17.15■□□□□ 0.34
PRKCSH-209ENST00000589838 NKIRAS2Q9NYR9 191 aa17.15■□□□□ 0.34
PRKCSH-209ENST00000589838 OR52A1Q9UKL2 312 aa17.15■□□□□ 0.34
PRKCSH-209ENST00000589838 FBXL3Q9UKT7 428 aa17.15■□□□□ 0.34
PRKCSH-209ENST00000589838 FREM3P0C091 2139 aa17.15■□□□□ 0.34
PRKCSH-209ENST00000589838 RALGAPA1Q6GYQ0 2036 aa17.15■□□□□ 0.34
PRKCSH-209ENST00000589838 GGT3PA6NGU5 568 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 SMLR1H3BR10 107 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 CFIP05156 583 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 H2BFMP0C1H6 154 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 SULT1A3P0DMM9 295 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 SULT1A4P0DMN0 295 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 DNASE1L1P49184 302 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 POU3F4P49335 361 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 BIDP55957 195 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 RPS15P62841 145 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 FMODQ06828 376 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 TRA2AQ13595 282 aaKnown RBP eCLIP17.14■□□□□ 0.332e-12■■■□□ 17.6
PRKCSH-209ENST00000589838 C2orf76Q3KRA6 126 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 THEM4Q5T1C6 240 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 LCN10Q6JVE6 187 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 UEVLDQ8IX04 471 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 OR11G2Q8NGC1 345 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 ST7LQ8TDW4 575 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 PTGES2Q9H7Z7 377 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 MED29Q9NX70 200 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 EMC9Q9Y3B6 208 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 HSPB11Q9Y547 144 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 B3GALT1Q9Y5Z6 326 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 MEIKINA0A087WXM9 373 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 A0A1B0GUH1 482 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 A0A1W2PQ72 361 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 H7C417 338 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 ZNF780AO75290 641 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 CTAG2O75638 210 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 KLK3P07288 261 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 CSF1P09603 554 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 UBCP0CG48 685 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 EIF1P41567 113 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 SSBP1Q04837 148 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 MYBPHQ13203 477 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 FAM166AQ6J272 317 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 LRFN4Q6PJG9 635 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 OR2M3Q8NG83 312 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 OR13C3Q8NGS6 347 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 POC1BQ8TC44 478 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 ELP5Q8TE02 316 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 SLC25A43Q8WUT9 341 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 MED30Q96HR3 178 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 RASL10BQ96S79 203 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 NOX3Q9HBY0 568 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 FSCN3Q9NQT6 498 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 KLHL13Q9P2N7 655 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 MTFP1Q9UDX5 166 aa17.14■□□□□ 0.33
PRKCSH-209ENST00000589838 CACNA1CQ13936 2221 aa17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 TMEM269A0A1B0GVZ9 245 aa17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 C19orf67A6NJJ6 358 aa17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 EFNA2O43921 213 aa17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 RAD1O60671 282 aa17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 ITGA5P08648 1049 aa17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 CD37P11049 281 aa17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 IGFBP3P17936 291 aaPredicted RBP17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 ADH6P28332 368 aa17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 CAPZA1P52907 286 aa17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 SNTA1Q13424 505 aa17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 ZNF767PQ75MW2 155 aa17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 MDGA2Q7Z553 956 aa17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 OR4K17Q8NGC6 315 aa17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 ZNF431Q8TF32 576 aaPredicted RBP17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 RNF133Q8WVZ7 376 aa17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 PPP1R14AQ96A00 147 aa17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 SLC25A44Q96H78 314 aaPredicted RBP17.13■□□□□ 0.33
PRKCSH-209ENST00000589838 LOC102723996A0A087X1L8 192 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 TMIGD3P0DMS9 266 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 DCTDP32321 178 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 LAMTOR1Q6IAA8 161 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 KLHL24Q6TFL4 600 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 OR6M1Q8NGM8 313 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 UTP23Q9BRU9 249 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 OR10A4Q9H209 315 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 GPN1Q9HCN4 374 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 G6PC2Q9NQR9 355 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 PRMT8Q9NR22 394 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 SHISA8B8ZZ34 492 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 HTR2CP28335 458 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 LAP3P28838 519 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 MMP16P51512 607 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 CLRN1P58418 232 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 ZNF782Q6ZMW2 699 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 LINC00346Q8IVM7 164 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 C9orf62Q8N4C0 152 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms