RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 IGHG3P01860 377 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 ZNF24P17028 368 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 RPS27P42677 84 aaKnown RBP10.69□□□□□ -0.7
CCBE1-203ENST00000589116 ROR2Q01974 943 aaKnown RBP10.69□□□□□ -0.7
CCBE1-203ENST00000589116 SRSF1Q07955 248 aaKnown RBP eCLIP10.69□□□□□ -0.7
CCBE1-203ENST00000589116 RASGEF1BQ0VAM2 473 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 EIF2B1Q14232 305 aaKnown RBP10.69□□□□□ -0.7
CCBE1-203ENST00000589116 MOGQ16653 247 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 FDX2Q6P4F2 183 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 DEGS2Q6QHC5 323 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 TMEM91Q6ZNR0 172 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 FOXL2NBQ6ZUU3 175 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 MCFD2Q8NI22 146 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 RNF128Q8TEB7 428 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 C11orf40Q8WZ69 217 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 ROBO4Q8WZ75 1007 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 GHSRQ92847 366 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 TMEM45BQ96B21 275 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 ZNF845Q96IR2 970 aaPredicted RBP10.69□□□□□ -0.7
CCBE1-203ENST00000589116 ABHD6Q9BV23 337 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 LDAHQ9H6V9 325 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 SPTA1P02549 2419 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 PSMD9O00233 223 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 GATBO75879 557 aaKnown RBP10.69□□□□□ -0.7
CCBE1-203ENST00000589116 MPZL1O95297 269 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 CPN1P15169 458 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 PSMB10P40306 273 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 GUCA1AP43080 201 aaPredicted RBP10.69□□□□□ -0.7
CCBE1-203ENST00000589116 DYNC1I2Q13409 638 aaKnown RBP10.69□□□□□ -0.7
CCBE1-203ENST00000589116 ALKBH1Q13686 389 aaKnown RBP10.69□□□□□ -0.7
CCBE1-203ENST00000589116 RNFT1Q5M7Z0 435 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 ZNF544Q6NX49 715 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 LRFN4Q6PJG9 635 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 KRT77Q7Z794 578 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.69□□□□□ -0.7
CCBE1-203ENST00000589116 C20orf196Q8IYI0 205 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 ABHD4Q8TB40 342 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 ST7LQ8TDW4 575 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 PHYHIPQ92561 330 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 RNF166Q96A37 237 aaPredicted RBP10.69□□□□□ -0.7
CCBE1-203ENST00000589116 SLC25A46Q96AG3 418 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 AMELYQ99218 206 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 CDADC1Q9BWV3 514 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 EXO5Q9H790 373 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 RNF122Q9H9V4 155 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 SLCO1C1Q9NYB5 712 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 EMC3Q9P0I2 261 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 CYB5R1Q9UHQ9 305 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 ING1Q9UK53 422 aaPredicted RBP10.69□□□□□ -0.7
CCBE1-203ENST00000589116 LIPGQ9Y5X9 500 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 A0A075B6Q4 140 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 ARPC4-TTLL3A0A0A6YYG9 625 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 CD8B2A6NJW9 211 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 DHHO43323 396 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 CDRT1O95170 752 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 ITGB2P05107 769 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 CD8BP10966 210 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 RPS19P39019 145 aaKnown RBP10.68□□□□□ -0.7
CCBE1-203ENST00000589116 SELENOPP49908 381 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 RORCP51449 518 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 ZNF84P51523 738 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 RIDAP52758 137 aaKnown RBP10.68□□□□□ -0.7
CCBE1-203ENST00000589116 LSM6P62312 80 aaKnown RBP10.68□□□□□ -0.7
CCBE1-203ENST00000589116 SRYQ05066 204 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 ZNF169Q14929 603 aaPredicted RBP10.68□□□□□ -0.7
CCBE1-203ENST00000589116 YIF1BQ5BJH7 314 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 LRRN1Q6UXK5 716 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 RHOUQ7L0Q8 258 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 AAED1Q7RTV5 226 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 DCXRQ7Z4W1 244 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 TEX19Q8NA77 164 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 OR6Q1Q8NGQ2 317 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 RNF133Q8WVZ7 376 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 DCLRE1CQ96SD1 692 aaKnown RBP10.68□□□□□ -0.7
CCBE1-203ENST00000589116 ULBP2Q9BZM5 246 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 DEFB127Q9H1M4 99 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 NELFAQ9H3P2 528 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 C1orf198Q9H425 327 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 SEC61A2Q9H9S3 476 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 ELOVL3Q9HB03 270 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 B3GAT2Q9NPZ5 323 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 POLE4Q9NR33 117 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 POLR1DQ9Y2S0 133 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 ZNF281Q9Y2X9 895 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 UGT2A1Q9Y4X1 527 aa10.68□□□□□ -0.7
CCBE1-203ENST00000589116 TNRC6AQ8NDV7 1962 aaKnown RBP10.68□□□□□ -0.7
CCBE1-203ENST00000589116 TMEM212A6NML5 194 aa10.67□□□□□ -0.7
CCBE1-203ENST00000589116 VGLL3A8MV65 326 aa10.67□□□□□ -0.7
CCBE1-203ENST00000589116 RPP14O95059 124 aaKnown RBP10.67□□□□□ -0.7
CCBE1-203ENST00000589116 INHBBP09529 407 aa10.67□□□□□ -0.7
CCBE1-203ENST00000589116 SDC2P34741 201 aa10.67□□□□□ -0.7
CCBE1-203ENST00000589116 EIF2S3P41091 472 aaKnown RBP10.67□□□□□ -0.7
CCBE1-203ENST00000589116 MTNR1BP49286 362 aa10.67□□□□□ -0.7
CCBE1-203ENST00000589116 CCR9P51686 369 aa10.67□□□□□ -0.7
CCBE1-203ENST00000589116 NANOS3P60323 173 aaKnown RBP10.67□□□□□ -0.7
CCBE1-203ENST00000589116 RNPS1Q15287 305 aaKnown RBP10.67□□□□□ -0.7
CCBE1-203ENST00000589116 RIPPLY2Q5TAB7 128 aa10.67□□□□□ -0.7
CCBE1-203ENST00000589116 CHMP1BQ7LBR1 199 aa10.67□□□□□ -0.7
CCBE1-203ENST00000589116 SPACA3Q8IXA5 215 aa10.67□□□□□ -0.7
CCBE1-203ENST00000589116 OR2G2Q8NGZ5 317 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms