RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ART1P52961 327 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 LSM6P62312 80 aaKnown RBP17.47■□□□□ 0.39
DDX39A-207ENST00000588542 NKX6-1P78426 367 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-207ENST00000588542 CDK5Q00535 292 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 CRMP1Q14194 572 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 GINS1Q14691 196 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 C11orf71Q6IPW1 123 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 ZNF544Q6NX49 715 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 SLC27A4Q6P1M0 643 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 ZDHHC13Q8IUH4 622 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 SVOPLQ8N434 492 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 PAQR4Q8N4S7 273 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-207ENST00000588542 SLC30A7Q8NEW0 376 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 NUP37Q8NFH4 326 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 AKR7LQ8NHP1 331 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 TMEM171Q8WVE6 324 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 ZNRF4Q8WWF5 429 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 WACQ9BTA9 647 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 NMNAT2Q9BZQ4 307 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 OR2H1Q9GZK4 316 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 PAPOLBQ9NRJ5 636 aaKnown RBP17.47■□□□□ 0.39
DDX39A-207ENST00000588542 CMC2Q9NRP2 79 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 CA10Q9NS85 328 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 OAZ3Q9UMX2 235 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 TIMM10BQ9Y5J6 103 aa17.47■□□□□ 0.39
DDX39A-207ENST00000588542 ZNF469Q96JG9 3925 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-207ENST00000588542 ITPR3Q14573 2671 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 IQCMA0A1B0GVH7 501 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 FAM171A2A8MVW0 826 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 TFP02787 698 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 CCL2P13500 99 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 NR4A1P22736 598 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 APOBEC3AP31941 199 aaPredicted RBP17.46■□□□□ 0.39
DDX39A-207ENST00000588542 PCBD1P61457 104 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 HSF2Q03933 536 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 PLP2Q04941 152 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 MEP1BQ16820 701 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 KDM4DQ6B0I6 523 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 KRT80Q6KB66 452 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 MUC15Q8N387 334 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 PARP8Q8N3A8 854 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 SLC26A10Q8NG04 563 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 GRIP2Q9C0E4 1043 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 C1orf198Q9H425 327 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 FAIMQ9NVQ4 179 aa17.46■□□□□ 0.39
DDX39A-207ENST00000588542 TMEFF2Q9UIK5 374 aaPredicted RBP17.46■□□□□ 0.39
DDX39A-207ENST00000588542 MITFO75030 526 aaPredicted RBP17.45■□□□□ 0.38
DDX39A-207ENST00000588542 TMCC2O75069 709 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 PTHP01270 115 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 PYCR1P32322 319 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 THBS4P35443 961 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 CENPAP49450 140 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 GLO1Q04760 184 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 DAG1Q14118 895 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 ADIPOQQ15848 244 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 ZSCAN26Q16670 478 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 AGAP6Q5VW22 663 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 TMEM236Q5W0B7 351 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 ZNF774Q6NX45 483 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 C10orf67Q8IYJ2 551 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 FBXL14Q8N1E6 418 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 OR9Q1Q8NGQ5 310 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 POM121L2Q96KW2 1035 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 SLC25A19Q9HC21 320 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 S100A14Q9HCY8 104 aa17.45■□□□□ 0.38
DDX39A-207ENST00000588542 ZNF701Q9NV72 531 aaPredicted RBP17.45■□□□□ 0.38
DDX39A-207ENST00000588542 LOC100509620A0A075B734 347 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 SAC3D1A6NKF1 404 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 SMPD2O60906 423 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 SNAP29O95721 258 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 IFNGP01579 166 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 CLUP10909 449 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 PAX1P15863 534 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 STOMP27105 288 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 SLC25A1P53007 311 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 CRISP1P54107 249 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 SNTB2Q13425 540 aaKnown RBP17.44■□□□□ 0.38
DDX39A-207ENST00000588542 AQP6Q13520 282 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 MSMPQ1L6U9 139 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 MST1LQ2TV78 715 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 VHLLQ6RSH7 139 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 ICA1LQ8NDH6 482 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 OR2T4Q8NH00 348 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 HCAR1Q9BXC0 346 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 ZNF442Q9H7R0 627 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 KRT84Q9NSB2 600 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 CBLN4Q9NTU7 201 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 MRPL22Q9NWU5 206 aaKnown RBP17.44■□□□□ 0.38
DDX39A-207ENST00000588542 ASH2LQ9UBL3 628 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 LHFPL6Q9Y693 200 aa17.44■□□□□ 0.38
DDX39A-207ENST00000588542 RIIAD1A6NNX1 92 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 SURF4O15260 269 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 GPRIN2O60269 458 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 GYPBP06028 91 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 ZNF3P17036 446 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 SPI1P17947 270 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 APLNRP35414 380 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 ESRRGP62508 458 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 HIST1H3AP68431 136 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 PPP2R2BQ00005 443 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms