RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 PIK3IP1Q96FE7 263 aa7.9□□□□□ -1.14
CIRBP-218ENST00000588344 MNTQ99583 582 aa7.9□□□□□ -1.14
CIRBP-218ENST00000588344 TEAD3Q99594 435 aa7.9□□□□□ -1.14
CIRBP-218ENST00000588344 PITX2Q99697 317 aa7.9□□□□□ -1.14
CIRBP-218ENST00000588344 TMEM204Q9BSN7 226 aa7.9□□□□□ -1.14
CIRBP-218ENST00000588344 ZNF416Q9BWM5 594 aa7.9□□□□□ -1.14
CIRBP-218ENST00000588344 OR51V1Q9H2C8 321 aa7.9□□□□□ -1.14
CIRBP-218ENST00000588344 HAO2Q9NYQ3 351 aa7.9□□□□□ -1.14
CIRBP-218ENST00000588344 CYB5R1Q9UHQ9 305 aa7.9□□□□□ -1.14
CIRBP-218ENST00000588344 ATPIF1Q9UII2 106 aa7.9□□□□□ -1.14
CIRBP-218ENST00000588344 POLR1DQ9Y2S0 133 aa7.9□□□□□ -1.14
CIRBP-218ENST00000588344 RNF115Q9Y4L5 304 aa7.9□□□□□ -1.14
CIRBP-218ENST00000588344 TMEM14AQ9Y6G1 99 aa7.9□□□□□ -1.14
CIRBP-218ENST00000588344 USP9YO00507 2555 aaPredicted RBP7.89□□□□□ -1.15
CIRBP-218ENST00000588344 IGHV1-18A0A0C4DH31 117 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 A0A1W2PR80 420 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 DPRXA6NFQ7 191 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 FAM183AA6NL82 134 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 PRKYO43930 277 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 SEC14L2O76054 403 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 MPZL1O95297 269 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 TFP02787 698 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 MMP7P09237 267 aaPredicted RBP7.89□□□□□ -1.15
CIRBP-218ENST00000588344 ZNF14P17017 642 aaPredicted RBP7.89□□□□□ -1.15
CIRBP-218ENST00000588344 ZNF32P17041 273 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 TUBG1P23258 451 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 EPHA2P29317 976 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 PYCR1P32322 319 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 APLNRP35414 380 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 ENTPD1P49961 510 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 NUDT6P53370 316 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 RPS7P62081 194 aaKnown RBP7.89□□□□□ -1.15
CIRBP-218ENST00000588344 ADAM8P78325 824 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 PSG4Q00888 419 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 POU4F2Q12837 409 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 ENDOGQ14249 297 aaKnown RBP7.89□□□□□ -1.15
CIRBP-218ENST00000588344 PCK2Q16822 640 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 TBC1D28Q2M2D7 210 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 KLHL12Q53G59 568 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 PABPC1L2AQ5JQF8 200 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 AADACL4Q5VUY2 407 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 ZNF295-AS1Q8N0V1 137 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 ZNF454Q8N9F8 522 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 SETD9Q8NE22 299 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 OR9Q1Q8NGQ5 310 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 FAM81AQ8TBF8 368 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 ZNF75AQ96N20 296 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 INTS14Q96SY0 518 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 MBOAT4Q96T53 435 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 MYCBPQ99417 103 aaPredicted RBP7.89□□□□□ -1.15
CIRBP-218ENST00000588344 C1QTNF6Q9BXI9 259 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 HDHD2Q9H0R4 259 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 CLEC4MQ9H2X3 399 aaPredicted RBP7.89□□□□□ -1.15
CIRBP-218ENST00000588344 MARCH7Q9H992 704 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 HINT3Q9NQE9 182 aaKnown RBP7.89□□□□□ -1.15
CIRBP-218ENST00000588344 TUBG2Q9NRH3 451 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 ZNF224Q9NZL3 707 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 ASH2LQ9UBL3 628 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 EIF3KQ9UBQ5 218 aaKnown RBP7.89□□□□□ -1.15
CIRBP-218ENST00000588344 NKX1-2Q9UD57 310 aaPredicted RBP7.89□□□□□ -1.15
CIRBP-218ENST00000588344 WARS2Q9UGM6 360 aaKnown RBP7.89□□□□□ -1.15
CIRBP-218ENST00000588344 FBXO9Q9UK97 447 aaPredicted RBP7.89□□□□□ -1.15
CIRBP-218ENST00000588344 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.89□□□□□ -1.15
CIRBP-218ENST00000588344 HSPE1-MOB4S4R3N1 261 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 PCNX1Q96RV3 2341 aa7.89□□□□□ -1.15
CIRBP-218ENST00000588344 INTS1Q8N201 2190 aaKnown RBP7.88□□□□□ -1.15
CIRBP-218ENST00000588344 OR6C6A6NF89 314 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 FAM171A2A8MVW0 826 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 J3QW42 95 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 HAX1O00165 279 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 ZNF593O00488 134 aaPredicted RBP7.88□□□□□ -1.15
CIRBP-218ENST00000588344 DLGAP1O14490 977 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 ABCD4O14678 606 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 SGCEO43556 437 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 APOC1P02654 83 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 SCG5P05408 212 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 CECR9P0C854 216 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 PATE4P0C8F1 98 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 SLC2A5P22732 501 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 STOMP27105 288 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 PCSK6P29122 969 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 HTR1FP30939 366 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 RAD52P43351 418 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 HSPA13P48723 471 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 GDI2P50395 445 aaKnown RBP7.88□□□□□ -1.15
CIRBP-218ENST00000588344 IDH3GP51553 393 aaPredicted RBP7.88□□□□□ -1.15
CIRBP-218ENST00000588344 TUBA1BP68363 451 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 TUBA4AP68366 448 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 HIST1H3AP68431 136 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 GALK2Q01415 458 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 NAAAQ02083 359 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 BSPH1Q075Z2 132 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 APOFQ13790 326 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 GGTLC2Q14390 218 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 RAB39AQ14964 217 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 OCLNQ16625 522 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 HIST2H3PS2Q5TEC6 136 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 LINC01590Q5TEZ4 76 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 SLC18B1Q6NT16 456 aa7.88□□□□□ -1.15
CIRBP-218ENST00000588344 SLC22A25Q6T423 547 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 189.8 ms