RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 AMELYQ99218 206 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 EDEM2Q9BV94 578 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 MRPL13Q9BYD1 178 aaKnown RBP10.06□□□□□ -0.8
LIG3-204ENST00000585740 HDHD2Q9H0R4 259 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 C11orf54Q9H0W9 315 aaPredicted RBP10.06□□□□□ -0.8
LIG3-204ENST00000585740 PROK2Q9HC23 129 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 B3GAT2Q9NPZ5 323 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 RBFOX1Q9NWB1 397 aaKnown RBP10.06□□□□□ -0.8
LIG3-204ENST00000585740 MED29Q9NX70 200 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 MRPS18CQ9Y3D5 142 aaKnown RBP10.06□□□□□ -0.8
LIG3-204ENST00000585740 LRP12Q9Y561 859 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 IGF2RP11717 2491 aa10.06□□□□□ -0.8
LIG3-204ENST00000585740 CACNA1CQ13936 2221 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 A0A0G2JMP0 313 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 A0A0X1KG70 313 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 A0A1W2PNR3 127 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 ANXA2P2A6NMY6 339 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 C9orf172C9J069 976 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 BOLA2-SMG1P6H3BVE0 249 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 PLA2G10O15496 165 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 LYRM1O43325 122 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 SULT1B1O43704 296 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 GSTZ1O43708 216 aaPredicted RBP10.05□□□□□ -0.8
LIG3-204ENST00000585740 PAHP00439 452 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 CD2P06729 351 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 ANXA2P07355 339 aaKnown RBP10.05□□□□□ -0.8
LIG3-204ENST00000585740 H2BFMP0C1H6 154 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 PGA4P0DJD7 388 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 PGA3P0DJD8 388 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 SNRPBP14678 240 aaKnown RBP10.05□□□□□ -0.8
LIG3-204ENST00000585740 SPINK2P20155 84 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 ACHEP22303 614 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 CFPP27918 469 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 SFTPDP35247 375 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 RPS27P42677 84 aaKnown RBP10.05□□□□□ -0.8
LIG3-204ENST00000585740 SOX2P48431 317 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 MMP15P51511 669 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 RPS18P62269 152 aaKnown RBP10.05□□□□□ -0.8
LIG3-204ENST00000585740 FOXC1Q12948 553 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 POU4F3Q15319 338 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 TMEM244Q5VVB8 128 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 RAET1LQ5VY80 246 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 ZNF57Q68EA5 555 aaPredicted RBP10.05□□□□□ -0.8
LIG3-204ENST00000585740 SLC25A47Q6Q0C1 308 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 KLHL24Q6TFL4 600 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 PLET1Q6UQ28 207 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.05□□□□□ -0.8
LIG3-204ENST00000585740 LRRTM1Q86UE6 522 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 AKAP14Q86UN6 197 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 ZNF227Q86WZ6 799 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.05□□□□□ -0.8
LIG3-204ENST00000585740 UBQLNLQ8IYU4 475 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 ZNF433Q8N7K0 673 aaPredicted RBP10.05□□□□□ -0.8
LIG3-204ENST00000585740 CELF2-AS1Q8N7Q2 184 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 DUSP18Q8NEJ0 188 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 OR4M2Q8NGB6 313 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 OR5M1Q8NGP8 315 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 OR5H6Q8NGV6 325 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 LGALS14Q8TCE9 139 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 C11orf40Q8WZ69 217 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 HPS1Q92902 700 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 MCHR2Q969V1 340 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 PNPLA2Q96AD5 504 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 C7orf50Q9BRJ6 194 aaKnown RBP10.05□□□□□ -0.8
LIG3-204ENST00000585740 THAP7Q9BT49 309 aaPredicted RBP10.05□□□□□ -0.8
LIG3-204ENST00000585740 SLC25A18Q9H1K4 315 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 C1orf198Q9H425 327 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 TMEM185BQ9H7F4 350 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 NIPAL2Q9H841 368 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 P4HTMQ9NXG6 502 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 ABI3Q9P2A4 366 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 LHX6Q9UPM6 363 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 FOXJ3Q9UPW0 622 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 PCDHGA9Q9Y5G4 932 aaKnown RBP10.05□□□□□ -0.8
LIG3-204ENST00000585740 SDK2Q58EX2 2172 aa10.05□□□□□ -0.8
LIG3-204ENST00000585740 LINC00854A0A1B0GVQ3 168 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 FAM240BA0A1B0GVZ2 78 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 OR2M5A3KFT3 312 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 MEGF11A6BM72 1044 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 CENPXA8MT69 81 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 ZIC3O60481 467 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 SLC43A1O75387 559 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 ISG15P05161 165 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 UBCP0CG48 685 aaKnown RBP10.04□□□□□ -0.8
LIG3-204ENST00000585740 PSKH1P11801 424 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 TCEA1P23193 301 aaKnown RBP10.04□□□□□ -0.8
LIG3-204ENST00000585740 CASRP41180 1078 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 MNDAP41218 407 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 NOVA1P51513 510 aaKnown RBP10.04□□□□□ -0.8
LIG3-204ENST00000585740 MRPS10P82664 201 aaKnown RBP10.04□□□□□ -0.8
LIG3-204ENST00000585740 FMODQ06828 376 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 KCNMB1Q16558 191 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 ACER2Q5QJU3 275 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 OR7E24Q6IFN5 339 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 RHOUQ7L0Q8 258 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 DCXRQ7Z4W1 244 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 GPAT4Q86UL3 456 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 ST7LQ8TDW4 575 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 RNF133Q8WVZ7 376 aa10.04□□□□□ -0.8
LIG3-204ENST00000585740 TMEM106AQ96A25 262 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms