RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 FARSAQ9Y285 508 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 ASF1AQ9Y294 204 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 ASPMQ8IZT6 3477 aa1.66□□□□□ -2.14
SMCHD1-211ENST00000584897 NF1P21359 2839 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 CFAP46Q8IYW2 2715 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 MYO9AB2RTY4 2548 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 TEX13DA0A0J9YY54 714 aaPredicted RBP1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A1W2PQD3 144 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A1W2PS18 150 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 LRIT2A6NDA9 550 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 PRORSD1PA6NEY8 169 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 KLRC4-KLRK1H3BQV0 150 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 LRRTM2O43300 516 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 CTNSO60931 367 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 E2F6O75461 281 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 CDK2AP2O75956 126 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 IGHV4-39P01824 125 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 STAG3L3P0CL85 134 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF17P17021 662 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 CSNK2A2P19784 350 aaPredicted RBP1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 C4BPBP20851 252 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 BCKDHBP21953 392 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 MMP11P24347 488 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 NTSP30990 170 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 EIF1P41567 113 aaKnown RBP1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 BCAP31P51572 246 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 DLX5P56178 289 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 ERVFC1-1P60608 527 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 IFFO1Q0D2I5 559 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 UBE2V2Q15819 145 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 HES3Q5TGS1 186 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 THOC7Q6I9Y2 204 aaKnown RBP1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 H3F3CQ6NXT2 135 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM205Q6UW68 189 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 Q6ZVQ6 151 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM219Q86XT9 240 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC38A6Q8IZM9 456 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM123Q8N131 208 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 EID2Q8N6I1 236 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 SAMD12Q8N8I0 201 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 OR2L5Q8NG80 312 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 SPATA22Q8NHS9 363 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 CD200R1Q8TD46 325 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 SPRYD4Q8WW59 207 aaPredicted RBP1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 TRUB1Q8WWH5 349 aaKnown RBP1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 LHX4Q969G2 390 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 TM4SF19Q96DZ7 209 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 STACQ99469 402 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM43Q9BTV4 400 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 DPH7Q9BTV6 452 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 RPP25Q9BUL9 199 aaKnown RBP1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 TM6SF2Q9BZW4 377 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 CXCL16Q9H2A7 254 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 GPN2Q9H9Y4 310 aaPredicted RBP1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 TIGARQ9NQ88 270 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 FGFR1OP2Q9NVK5 253 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 GNG12Q9UBI6 72 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 KLK11Q9UBX7 282 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 BOKQ9UMX3 212 aaPredicted RBP1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 NOP16Q9Y3C1 178 aaKnown RBP1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 RNF215Q9Y6U7 377 aa1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 SMG1Q96Q15 3661 aaKnown RBP1.65□□□□□ -2.14
SMCHD1-211ENST00000584897 USP9XQ93008 2570 aaPredicted RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 EXOC1LA0A1B0GW35 172 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 SH3PXD2BA1X283 911 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 OR5H15A6NDH6 313 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 LRRC30A6NM36 301 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 C9JVG2 144 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 H3BSA7 217 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 ABCD4O14678 606 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC31A1O15431 190 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 ACTL6AO96019 429 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 MT-ND1P03886 318 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 ZCCHC18P0CG32 403 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 MYL2P10916 166 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 BCL3P20749 454 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 IMPDH1P20839 514 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 ELK4P28324 431 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 CD1CP29017 333 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 PTPN6P29350 595 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 KLK7P49862 253 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 RIDAP52758 137 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 SMIM11AP58511 58 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 LINC00205P59089 165 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 RPL23AP62750 156 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 CDC20Q12834 499 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 PDIA2Q13087 525 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 KLF5Q13887 457 aaPredicted RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 FAM189A2Q15884 450 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 ZIC1Q15915 447 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 EIPR1Q53HC9 387 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 RNASEKQ6P5S7 137 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 RTL4Q6ZR62 310 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 Q6ZS52 159 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 TUBA1AQ71U36 451 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 OR4N5Q8IXE1 308 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 GPR26Q8NDV2 337 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 PCNPQ8WW12 178 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 CMTM5Q96DZ9 223 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms