RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	DPAGT1	Q9H3H5	408 aa		10.52	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	MEPE	Q9NQ76	525 aa	Predicted RBP	10.52	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.52	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	DUSP22	Q9NRW4	184 aa		10.52	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	TMEM160	Q9NX00	188 aa		10.52	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	RCE1	Q9Y256	329 aa		10.52	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	GOLT1B	Q9Y3E0	138 aa		10.52	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	WIF1	Q9Y5W5	379 aa		10.52	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	HS3ST3A1	Q9Y663	406 aa		10.52	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	FKBP7	Q9Y680	259 aa		10.52	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063		A0A1B0GTH9	108 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	SIGLEC5	O15389	551 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	CSF1	P09603	554 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	DNASE1	P24855	282 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	VEGFC	P49767	419 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	SNTB2	Q13425	540 aa	Known RBP	10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	LRFN4	Q6PJG9	635 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	WDR5B	Q86VZ2	330 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	PARG	Q86W56	976 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	LINC00471	Q8N535	108 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	OR2T4	Q8NH00	348 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	LGALS14	Q8TCE9	139 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ZPLD1	Q8TCW7	415 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	CNOT9	Q92600	299 aa	Known RBP	10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	SCARF2	Q96GP6	870 aa	Predicted RBP	10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	PTDSS2	Q9BVG9	487 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	DNTTIP1	Q9H147	329 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	SLCO5A1	Q9H2Y9	848 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	PRDM13	Q9H4Q3	707 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	POT1	Q9NUX5	634 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	NDRG3	Q9UGV2	375 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	HEATR5A	Q86XA9	2040 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	FANCM	Q8IYD8	2048 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	IRGM	A1A4Y4	181 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	MEIS3P1	A6NDR6	274 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	BHLHE40	O14503	412 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	TNFRSF10C	O14798	259 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ZNF217	O75362	1048 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	FBXO24	O75426	580 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	WDPCP	O95876	746 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	MT-ND5	P03915	603 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	MYF5	P13349	255 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	NDUFS1	P28331	727 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	SOX2	P48431	317 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	MTNR1B	P49286	362 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	RPS15	P62841	145 aa	Known RBP	10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	SCGB2A2	Q13296	93 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	TIGD3	Q6B0B8	471 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	GID4	Q8IVV7	300 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	DNAAF1	Q8NEP3	725 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	OR4K14	Q8NGD5	310 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	OR6X1	Q8NH79	312 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ZDHHC1	Q8WTX9	485 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	TSSK2	Q96PF2	358 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ERMAP	Q96PL5	475 aa	Predicted RBP	10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	DDO	Q99489	341 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	KLHDC3	Q9BQ90	382 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	CACYBP	Q9HB71	228 aa	Known RBP	10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ASB6	Q9NWX5	421 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	DNAJB11	Q9UBS4	358 aa		10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	STRAP	Q9Y3F4	350 aa	Known RBP	10.51	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	SIX6	O95475	246 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	TF	P02787	698 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	NGFR	P08138	427 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	UCHL1	P09936	223 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	SBK2	P0C263	348 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ANXA3	P12429	323 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	CD38	P28907	300 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	GABRA3	P34903	492 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	SERPINF1	P36955	418 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	MLF1	P58340	268 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	FAM53B	Q14153	422 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	TRAM1	Q15629	374 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	BICRAL	Q6AI39	1079 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	COMMD7	Q86VX2	200 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	FTMT	Q8N4E7	242 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	COX18	Q8N8Q8	333 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	GATS	Q8NAP1	163 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	OR4C6	Q8NH72	309 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	MS4A4E	Q96PG1	132 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	LRRC61	Q9BV99	259 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ADGRL4	Q9HBW9	690 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	DAPP1	Q9UN19	280 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063		H0YGG7	62 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ZNF593	O00488	134 aa	Predicted RBP	10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	SELENOF	O60613	162 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	RAD1	O60671	282 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	CTNS	O60931	367 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	NPR2	P20594	1047 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ZP1	P60852	638 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	GUCA2A	Q02747	115 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ZNF169	Q14929	603 aa	Predicted RBP	10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	NKAIN1	Q4KMZ8	207 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	DCST2	Q5T1A1	773 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	FIGLA	Q6QHK4	219 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ZNF767P	Q75MW2	155 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ZFP82	Q8N141	532 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	METTL27	Q8N6F8	245 aa	Predicted RBP	10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	OR52B4	Q8NGK2	314 aa		10.5	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	NEK7	Q8TDX7	302 aa		10.5	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms