RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 ZNF250P15622 560 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 MUC1P15941 1255 aaPredicted RBP2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 RRM2P31350 389 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 SLC1A1P43005 524 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 ZNF138P52744 262 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 CDH6P55285 790 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 ACTG2P63267 376 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 SLC25A11Q02978 314 aaKnown RBP2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 PON2Q15165 354 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 SHHQ15465 462 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 STK11Q15831 433 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 SLC8B1Q6J4K2 584 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 ZYG11AQ6WRX3 759 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 NTM-AS1Q6ZSK4 140 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 NIPA1Q7RTP0 329 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 TMEM150AQ86TG1 271 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 MMAAQ8IVH4 418 aaKnown RBP2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 IQCKQ8N0W5 287 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 TTC5Q8N0Z6 440 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 N4BP2L2Q92802 583 aaPredicted RBP2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 MRGPRFQ96AM1 343 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 RNF157Q96PX1 679 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 CCDC77Q9BR77 488 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 NUP58Q9BVL2 599 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 SCRT1Q9BWW7 348 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 RSPO3Q9BXY4 272 aaPredicted RBP2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 SAV1Q9H4B6 383 aaPredicted RBP2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 GPATCH2LQ9NWQ4 482 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 UVRAGQ9P2Y5 699 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 COL27A1Q8IZC6 1860 aaPredicted RBP2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 CAMTA1Q9Y6Y1 1673 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 IGKV6-21A0A0C4DH24 114 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 LYRM9A8MSI8 78 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 DPM1O60762 260 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 YIF1AO95070 293 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 TSPAN13O95857 204 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 AGTP01019 485 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 KRT14P02533 472 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 RHOXF2BP0C7M4 288 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 PBLDP30039 288 aaPredicted RBP2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 HNRNPH3P31942 346 aaKnown RBP2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 CX3CR1P49238 355 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 RAB10P61026 200 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 LOXL1Q08397 574 aaPredicted RBP2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 MAB21L1Q13394 359 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 OR7A5Q15622 319 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 CHRFAM7AQ494W8 412 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 ARMC12Q5T9G4 340 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 C9orf135Q5VTT2 229 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 UBE2UQ5VVX9 321 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 METAP1DQ6UB28 335 aaPredicted RBP2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 FAM43BQ6ZT52 329 aaPredicted RBP2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 ABHD12BQ7Z5M8 362 aaPredicted RBP2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 ZNF695Q8IW36 515 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 CDH26Q8IXH8 852 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 SLC7A13Q8TCU3 470 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 PDXPQ96GD0 296 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 OR51M1Q9H341 326 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 NTN4Q9HB63 628 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 NMRK1Q9NWW6 199 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 HRASLS2Q9NWW9 162 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 CTNNA3Q9UI47 895 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 ZNF222Q9UK12 451 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 AHDC1Q5TGY3 1603 aaPredicted RBP2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 PLA2R1Q13018 1463 aa2.26□□□□□ -2.05
PPP4R1-227ENST00000583988 KIF26AQ9ULI4 1882 aaPredicted RBP2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 AP3B1O00203 1094 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 CT45A6P0DMU7 189 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 CT45A5P0DMU8 189 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 CT45A7P0DMV0 189 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 OR5H8P0DN80 308 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 TCN2P20062 427 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 MAS1LP35410 378 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 PRMT2P55345 433 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 STXBP1P61764 594 aaKnown RBP2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 ABCA11PQ4W5N1 156 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 CT45A1Q5HYN5 189 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 CCDC183Q5T5S1 534 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 CARD17Q5XLA6 110 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 FBXW12Q6X9E4 464 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 WDR86Q86TI4 376 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 GTPBP8Q8N3Z3 284 aaPredicted RBP2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 CT45A3Q8NHU0 189 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 ZNF502Q8TBZ5 544 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 C15orf40Q8WUR7 153 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 RGP1Q92546 391 aaPredicted RBP2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 NTAN1Q96AB6 310 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 DUS3LQ96G46 650 aaKnown RBP2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 NARS2Q96I59 477 aaKnown RBP2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 TMEM165Q9HC07 324 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 KCNJ16Q9NPI9 418 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 GGA2Q9UJY4 613 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 VANGL2Q9ULK5 521 aa2.25□□□□□ -2.05
PPP4R1-227ENST00000583988 DENND4AQ7Z401 1863 aa2.24□□□□□ -2.05
PPP4R1-227ENST00000583988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.24□□□□□ -2.05
PPP4R1-227ENST00000583988 TUBGCP6Q96RT7 1819 aa2.24□□□□□ -2.05
PPP4R1-227ENST00000583988 TRAV6A0A075B6T7 132 aa2.24□□□□□ -2.05
PPP4R1-227ENST00000583988 A0A0U1RQV1 116 aa2.24□□□□□ -2.05
PPP4R1-227ENST00000583988 TMEM223A0PJW6 202 aa2.24□□□□□ -2.05
PPP4R1-227ENST00000583988 H7C0C1 242 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms