RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	VSX1	Q9NZR4	365 aa	Predicted RBP	10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ACTR3B	Q9P1U1	418 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	TMCC3	Q9ULS5	477 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ADAM18	Q9Y3Q7	739 aa		10.8	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	COL6A5	A8TX70	2615 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ARPC3	O15145	178 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	IDH3B	O43837	385 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	KHDRBS3	O75525	346 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	IFNA2	P01563	188 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	LCK	P06239	509 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	FAM157B	P0CG42	384 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ZNF26	P17031	533 aa	Predicted RBP	10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ACHE	P22303	614 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	APEX1	P27695	318 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CRABP1	P29762	137 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ARHGDIA	P52565	204 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	HMGA2	P52926	109 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	TEK	Q02763	1124 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	KRR1	Q13601	381 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ENDOG	Q14249	297 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	GGTLC2	Q14390	218 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	SEC23B	Q15437	767 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CARTPT	Q16568	116 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	NKPD1	Q17RQ9	610 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ZNF718	Q3SXZ3	478 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CHRFAM7A	Q494W8	412 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	MBNL2	Q5VZF2	373 aa	Known RBP	10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	TMEM154	Q6P9G4	183 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	DNM1P34	Q6PK57	102 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	GLB1L2	Q8IW92	636 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	PAQR4	Q8N4S7	273 aa	Predicted RBP	10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	FITM2	Q8N6M3	262 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	NSL1	Q96IY1	281 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	SNX18	Q96RF0	628 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ZNF416	Q9BWM5	594 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	WNT5B	Q9H1J7	359 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CYSLTR2	Q9NS75	346 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ATPIF1	Q9UII2	106 aa		10.79	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	LOC100509620	A0A075B734	347 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	IGHV4-61	A0A0C4DH41	118 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708		A0A1W2PPL8	197 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	C5orf49	A4QMS7	147 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	C17orf100	A8MU93	164 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708		J3QW42	95 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CCL2	P13500	99 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	HOXB6	P17509	224 aa	Known RBP	10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CALB2	P22676	271 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	GCH1	P30793	250 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	SLC6A6	P31641	620 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	THBS2	P35442	1172 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ALDH3B1	P43353	468 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	SPIB	Q01892	262 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	AQP6	Q13520	282 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	KCNMB1	Q16558	191 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	RFX4	Q33E94	735 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ZMAT1	Q5H9K5	638 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	FAM166A	Q6J272	317 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	RPL13AP3	Q6NVV1	102 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	C1orf94	Q6P1W5	598 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ZER1	Q7Z7L7	766 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	LRP11	Q86VZ4	500 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	MEX3D	Q86XN8	651 aa	Known RBP	10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ZDHHC21	Q8IVQ6	265 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	ZCCHC24	Q8N2G6	241 aa	Known RBP	10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CLDN22	Q8N7P3	220 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	CCDC197	Q8NCU1	140 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	OR1J1	Q8NGS3	322 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	OR52J3	Q8NH60	311 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	C1orf159	Q96HA4	380 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	COG8	Q96MW5	612 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	DIRC2	Q96SL1	478 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	TRIM15	Q9C019	465 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	TPK1	Q9H3S4	243 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	MAGIX	Q9H6Y5	334 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	TBCCD1	Q9NVR7	557 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	TAAR3P	Q9P1P4	343 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708	KCNS2	Q9ULS6	477 aa		10.78	□□□□□ -0.68
CDK5RAP3-222	ENST00000581708		B2RBV5	119 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	OR10H3	O60404	316 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	LMX1B	O60663	402 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	LILRA1	O75019	489 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ADH4	P08319	380 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	FAM157C	P0CG43	387 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	CTLA4	P16410	223 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	MAGEA2	P43356	314 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	GSS	P48637	474 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	FXYD6P3	P58550	94 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	TSPAN31	Q12999	210 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	GK3P	Q14409	553 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ELFN2	Q5R3F8	820 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	THSD4	Q6ZMP0	1018 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	PRIMA1	Q86XR5	153 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	NPEPL1	Q8NDH3	523 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	AKR7L	Q8NHP1	331 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	GNPDA2	Q8TDQ7	276 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	MSI2	Q96DH6	328 aa	Known RBP	10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	MARS2	Q96GW9	593 aa	Known RBP	10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	C4orf45	Q96LM5	186 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	DCLRE1C	Q96SD1	692 aa	Known RBP	10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	C1orf21	Q9H246	121 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms