RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 ATP6V1B2P21281 511 aa16.72■□□□□ 0.27
SREBF1-220ENST00000581707 KLF3P57682 345 aaPredicted RBP16.72■□□□□ 0.27
SREBF1-220ENST00000581707 MTX3Q5HYI7 312 aa16.72■□□□□ 0.27
SREBF1-220ENST00000581707 UGT2A3Q6UWM9 527 aa16.72■□□□□ 0.27
SREBF1-220ENST00000581707 ADCK1Q86TW2 530 aa16.72■□□□□ 0.27
SREBF1-220ENST00000581707 OR1J1Q8NGS3 322 aa16.72■□□□□ 0.27
SREBF1-220ENST00000581707 WACQ9BTA9 647 aa16.72■□□□□ 0.27
SREBF1-220ENST00000581707 BPESC1Q9GZL8 116 aa16.72■□□□□ 0.27
SREBF1-220ENST00000581707 SYT4Q9H2B2 425 aa16.72■□□□□ 0.27
SREBF1-220ENST00000581707 MUC13Q9H3R2 512 aa16.72■□□□□ 0.27
SREBF1-220ENST00000581707 RERGLQ9H628 205 aa16.72■□□□□ 0.27
SREBF1-220ENST00000581707 EMC7Q9NPA0 242 aa16.72■□□□□ 0.27
SREBF1-220ENST00000581707 VSX1Q9NZR4 365 aaPredicted RBP16.72■□□□□ 0.27
SREBF1-220ENST00000581707 TAAR3PQ9P1P4 343 aa16.72■□□□□ 0.27
SREBF1-220ENST00000581707 GPR160Q9UJ42 338 aa16.72■□□□□ 0.27
SREBF1-220ENST00000581707 IGLV3-9A0A075B6K5 115 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 A8MV72 311 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-220ENST00000581707 KHDRBS3O75525 346 aaKnown RBP16.71■□□□□ 0.27
SREBF1-220ENST00000581707 KRT36O76013 467 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 TXNDC12O95881 172 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 NAT2P11245 290 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 APEHP13798 732 aaKnown RBP16.71■□□□□ 0.27
SREBF1-220ENST00000581707 FPR3P25089 353 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 GIFP27352 417 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 WNT5AP41221 380 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 CDKN2AP42771 156 aaKnown RBP16.71■□□□□ 0.27
SREBF1-220ENST00000581707 TRIM25Q14258 630 aaKnown RBP16.71■□□□□ 0.27
SREBF1-220ENST00000581707 NKPD1Q17RQ9 610 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 RFX4Q33E94 735 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 CYB5R2Q6BCY4 276 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 ZNF774Q6NX45 483 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 UNQ6126/PRO20091Q6UXV3 157 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 PTCHD4Q6ZW05 846 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 DHFR2Q86XF0 187 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 FANK1Q8TC84 345 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 ERMAPQ96PL5 475 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-220ENST00000581707 SLCO1C1Q9NYB5 712 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 FAM53CQ9NYF3 392 aa16.71■□□□□ 0.27
SREBF1-220ENST00000581707 IGHV4-61A0A0C4DH41 118 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 LYNX1G3V0Z9 82 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 IMPA2O14732 288 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 PPP1R3DO95685 299 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 IGHV4-31P0DP07 118 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 LYNX1P0DP58 116 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 SLC6A6P31641 620 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 GSSP48637 474 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 HMGA2P52926 109 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 ALKBH6Q3KRA9 238 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 C6orf52Q5T4I8 152 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 C1orf94Q6P1W5 598 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 GLB1L2Q8IW92 636 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 ZNF101Q8IZC7 436 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 GNPDA2Q8TDQ7 276 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 NUAK2Q9H093 628 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 OR52D1Q9H346 318 aa16.7■□□□□ 0.26
SREBF1-220ENST00000581707 COA3Q9Y2R0 106 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-220ENST00000581707 TCRBV5S2A0A599 114 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 HPXP02790 462 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 ZNF23P17027 643 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 GZMKP49863 264 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 MS4A2Q01362 244 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 SCRN3Q0VDG4 424 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 TSPAN31Q12999 210 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 MOGQ16653 247 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 ZNF718Q3SXZ3 478 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 ELFN2Q5R3F8 820 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 LCN8Q6JVE9 175 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 C1orf174Q8IYL3 243 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 SNX33Q8WV41 574 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 SAMD8Q96LT4 415 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 MAGIXQ9H6Y5 334 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 HINT3Q9NQE9 182 aaKnown RBP16.69■□□□□ 0.26
SREBF1-220ENST00000581707 TAS2R1Q9NYW7 299 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 PRPF19Q9UMS4 504 aaKnown RBP16.69■□□□□ 0.26
SREBF1-220ENST00000581707 LYVE1Q9Y5Y7 322 aa16.69■□□□□ 0.26
SREBF1-220ENST00000581707 MALRD1Q5VYJ5 2156 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 C17orf100A8MU93 164 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 TNFRSF11BO00300 401 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 ARPC3O15145 178 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 MPZL1O95297 269 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 IGHV3-13P01766 116 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 COX5BP10606 129 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 CRABP1P29762 137 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 MAGEA2P43356 314 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 LSM6P62312 80 aaKnown RBP16.68■□□□□ 0.26
SREBF1-220ENST00000581707 RIN1Q13671 783 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 SPATA46Q5T0L3 261 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 PGBD2Q6P3X8 592 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 TMEM154Q6P9G4 183 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 RDH5Q92781 318 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 IFT27Q9BW83 186 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 TRIM15Q9C019 465 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 C1orf21Q9H246 121 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 ELOVL3Q9HB03 270 aa16.68■□□□□ 0.26
SREBF1-220ENST00000581707 NDRG4Q9ULP0 352 aaKnown RBP16.68■□□□□ 0.26
SREBF1-220ENST00000581707 SGCEO43556 437 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 ICMTO60725 284 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 COL8A2P25067 703 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 NOS3P29474 1203 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 GCH1P30793 250 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms