RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 OR10J6PQ8NGY7 276 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 MCUR1Q96AQ8 359 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 CREB3L1Q96BA8 519 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 ECHDC3Q96DC8 303 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 CHAC1Q9BUX1 264 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 SLC25A2Q9BXI2 301 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 VPS37BQ9H9H4 285 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 GPATCH2LQ9NWQ4 482 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 HRASLS2Q9NWW9 162 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 OR12D3Q9UGF7 316 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 MAPK8IP3Q9UPT6 1336 aa2.89□□□□□ -1.95
SMCHD1-205ENST00000581383 IGKV2D-24A0A075B6R9 120 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 IGHV5-51A0A0C4DH38 117 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 IGHV3-66A0A0C4DH42 116 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 OR5H8P0DN80 308 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 MYL2P10916 166 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 DCKP27707 260 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 CSNK1A1P48729 337 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 CSNK1EP49674 416 aaKnown RBP2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 EIF3EP60228 445 aaKnown RBP2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 RPS15P62841 145 aaKnown RBP2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 LIPEQ05469 1076 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 ERCC8Q13216 396 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 ZNF691Q5VV52 312 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 DUX4L9Q6RFH8 374 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 PLET1Q6UQ28 207 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 LUZP2Q86TE4 346 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 SAXO1Q8IYX7 474 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 FOPNLQ96NB1 174 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 OR2A5Q96R48 311 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 TGS1Q96RS0 853 aaKnown RBP2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 ISYNA1Q9NPH2 558 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 GCNT4Q9P109 453 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 TMED5Q9Y3A6 229 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 CAMTA1Q9Y6Y1 1673 aa2.88□□□□□ -1.95
SMCHD1-205ENST00000581383 IGHV3-74A0A0B4J1X5 117 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 A0A1W2PP18 115 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 NDUFAB1O14561 156 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 CHST1O43916 411 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 OR2F2O95006 317 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 BCHEP06276 602 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 PGAM1P18669 254 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 RAB3BP20337 219 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 BCKDHBP21953 392 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 F2RP25116 425 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 CEACAM3P40198 252 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 ZNF138P52744 262 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 STXBP1P61764 594 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 RAP1AP62834 184 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 MERTKQ12866 999 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 SF3A2Q15428 464 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 OR7A5Q15622 319 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 ARL9Q6T311 187 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 MBOAT1Q6ZNC8 495 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 EIF3MQ7L2H7 374 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 TMEM150AQ86TG1 271 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 PGAM4Q8N0Y7 254 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 OR10G2Q8NGC3 310 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 OR5W2Q8NH69 310 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 CAPSLQ8WWF8 208 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 EEF1AKMT3Q96AZ1 226 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 DNAJC1Q96KC8 554 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 GEMIN7Q9H840 131 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 TMEM9BQ9NQ34 198 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 UVRAGQ9P2Y5 699 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 ZNF222Q9UK12 451 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 MYO10Q9HD67 2058 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 MROH7-TTC4A0A0A0MT08 1334 aa2.87□□□□□ -1.95
SMCHD1-205ENST00000581383 A0A1B0GVX0 72 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 AIREO43918 545 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 EIF4E2O60573 245 aaKnown RBP2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 DNAJB6O75190 326 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 FKBP6O75344 327 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 HLA-DPB1P04440 258 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 RETP07949 1114 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 CCNB1P14635 433 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 NAMPTP43490 491 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 UQCRFS1P47985 274 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 CRISP1P54107 249 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 RCAN2Q14206 197 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 FAM83EQ2M2I3 478 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 THEM4Q5T1C6 240 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 BZW1Q7L1Q6 419 aaKnown RBP2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 CMC1Q7Z7K0 106 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 OR2A1Q8NGT9 310 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 LYPD6BQ8NI32 183 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 NRGNQ92686 78 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 TM4SF18Q96CE8 201 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 PRRC1Q96M27 445 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 MICU1Q9BPX6 476 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 FAM49BQ9NUQ9 324 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 CCDC59Q9P031 241 aaKnown RBP2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 SLC17A4Q9Y2C5 497 aa2.86□□□□□ -1.95
SMCHD1-205ENST00000581383 TRBV9A0A0B4J1U6 114 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 A0A1B0GW55 424 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 LYRM9A8MSI8 78 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 TEX46H3BTG2 121 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 HUS1O60921 280 aa2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 ZNF324O75467 553 aaPredicted RBP2.85□□□□□ -1.95
SMCHD1-205ENST00000581383 CLDN11O75508 207 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms