RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-205ENST00000580980 ERCC1P07992 297 aaPredicted RBP10.52□□□□□ -0.73
PSMD3-205ENST00000580980 OSMP13725 252 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 GLRXP35754 106 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 PDLIM4P50479 330 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 RAD23AP54725 363 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 FXYD6P3P58550 94 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 RPS23P62266 143 aaKnown RBP10.52□□□□□ -0.73
PSMD3-205ENST00000580980 ESRRGP62508 458 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 GALK2Q01415 458 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 RUNX1T1Q06455 604 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 RAB39AQ14964 217 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 FAM205BPQ63HN1 556 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 LPCAT4Q643R3 524 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 KRT80Q6KB66 452 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 TMEM53Q6P2H8 277 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 SLC16A14Q7RTX9 510 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 OR13C2Q8NGS9 318 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 FANK1Q8TC84 345 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 NRG4Q8WWG1 115 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 NEU4Q8WWR8 484 aaPredicted RBP10.52□□□□□ -0.73
PSMD3-205ENST00000580980 MS4A3Q96HJ5 214 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 SORCS2Q96PQ0 1159 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 TNFRSF13CQ96RJ3 184 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 SLC29A1Q99808 456 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 VRK1Q99986 396 aaPredicted RBP10.52□□□□□ -0.73
PSMD3-205ENST00000580980 ALG12Q9BV10 488 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 KRT84Q9NSB2 600 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 PLCE1Q9P212 2302 aa10.52□□□□□ -0.73
PSMD3-205ENST00000580980 LOC390937A0A1W2PQ73 354 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 TMEM129A0AVI4 362 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 A6NIZ1 184 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 INAFM1C9JVW0 142 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 E9PQ18 207 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 APEHP13798 732 aaKnown RBP10.51□□□□□ -0.73
PSMD3-205ENST00000580980 PCSK6P29122 969 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 RAP1BP61224 184 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 RPL27P61353 136 aaKnown RBP10.51□□□□□ -0.73
PSMD3-205ENST00000580980 RAP1AP62834 184 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 MRPS34P82930 218 aaKnown RBP10.51□□□□□ -0.73
PSMD3-205ENST00000580980 SNCBQ16143 134 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 THEM4Q5T1C6 240 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 SMARCD3Q6STE5 483 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 LRRC75AQ8NAA5 344 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 SYT14Q8NB59 555 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 OR1J2Q8NGS2 313 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 FGFBP3Q8TAT2 258 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 MRPL24Q96A35 216 aaKnown RBP10.51□□□□□ -0.73
PSMD3-205ENST00000580980 NMD3Q96D46 503 aaKnown RBP10.51□□□□□ -0.73
PSMD3-205ENST00000580980 RBP7Q96R05 134 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 KCNK17Q96T54 332 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 SH3GL3Q99963 347 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 KCNN2Q9H2S1 579 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 OR52D1Q9H346 318 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 RNF121Q9H920 327 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 SIAEQ9HAT2 523 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 ZNF346Q9UL40 294 aaKnown RBP10.51□□□□□ -0.73
PSMD3-205ENST00000580980 ORC6Q9Y5N6 252 aa10.51□□□□□ -0.73
PSMD3-205ENST00000580980 TRAV27A0A087WT01 109 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 VWC2LB2RUY7 222 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 DLGAP1O14490 977 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 NDUFB2O95178 105 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 SNAP29O95721 258 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 PATE4P0C8F1 98 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 USF1P22415 310 aaPredicted RBP10.5□□□□□ -0.73
PSMD3-205ENST00000580980 VHLP40337 213 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 CTXN1P60606 82 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 MYBPC1Q00872 1141 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 PLP2Q04941 152 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 LRRC36Q1X8D7 754 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 SLC25A47Q6Q0C1 308 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 DPY19L2P2Q6ZN68 376 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 MEX3DQ86XN8 651 aaKnown RBP10.5□□□□□ -0.73
PSMD3-205ENST00000580980 ZNF584Q8IVC4 421 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 ZNF540Q8NDQ6 660 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 SLC30A7Q8NEW0 376 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 OR52L1Q8NGH7 329 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 OR51A7Q8NH64 312 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 HDAC2Q92769 488 aaKnown RBP10.5□□□□□ -0.73
PSMD3-205ENST00000580980 PIMREGQ9BSJ6 248 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 SLC25A19Q9HC21 320 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 DYNLRB1Q9NP97 96 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 NRIP3Q9NQ35 241 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 SMPD3Q9NY59 655 aaPredicted RBP10.5□□□□□ -0.73
PSMD3-205ENST00000580980 BAIAP2Q9UQB8 552 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 ALPK2Q86TB3 2170 aa10.5□□□□□ -0.73
PSMD3-205ENST00000580980 NIPBLQ6KC79 2804 aaeCLIP10.49□□□□□ -0.73
PSMD3-205ENST00000580980 IQCMA0A1B0GVH7 501 aa10.49□□□□□ -0.73
PSMD3-205ENST00000580980 BHLHE40O14503 412 aa10.49□□□□□ -0.73
PSMD3-205ENST00000580980 ARPC3O15145 178 aa10.49□□□□□ -0.73
PSMD3-205ENST00000580980 SYNGR3O43761 229 aa10.49□□□□□ -0.73
PSMD3-205ENST00000580980 AHCYL1O43865 530 aa10.49□□□□□ -0.73
PSMD3-205ENST00000580980 CRLF1O75462 422 aa10.49□□□□□ -0.73
PSMD3-205ENST00000580980 LY6HO94772 140 aa10.49□□□□□ -0.73
PSMD3-205ENST00000580980 CD14P08571 375 aa10.49□□□□□ -0.73
PSMD3-205ENST00000580980 MMP7P09237 267 aaPredicted RBP10.49□□□□□ -0.73
PSMD3-205ENST00000580980 SLC6A6P31641 620 aa10.49□□□□□ -0.73
PSMD3-205ENST00000580980 CD47Q08722 323 aa10.49□□□□□ -0.73
PSMD3-205ENST00000580980 TOP3AQ13472 1001 aaPredicted RBP10.49□□□□□ -0.73
PSMD3-205ENST00000580980 TBC1D28Q2M2D7 210 aa10.49□□□□□ -0.73
PSMD3-205ENST00000580980 TMEM249Q2WGJ8 235 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms