RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 HDHD2Q9H0R4 259 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 NIPAL2Q9H841 368 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 FKRPQ9H9S5 495 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 WASF3Q9UPY6 502 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 FAM240BA0A1B0GVZ2 78 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ETV2O00321 342 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 CNR1P21554 472 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SDHAP31040 664 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 CENPAP49450 140 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 DSCR4P56555 118 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SIRPAP78324 504 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 MELKQ14680 651 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 DMKNQ6E0U4 476 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 LAMTOR1Q6IAA8 161 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 MAMDC2Q7Z304 686 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SPERTQ8NA61 448 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 OR14L1PQ8NHC6 308 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 KCNE4Q8WWG9 221 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 LIPHQ8WWY8 451 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ADAM30Q9UKF2 790 aa11.34□□□□□ -0.59
CDK5RAP3-217ENST00000580287 IGHV3-15A0A0B4J1V0 119 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 LYRM1O43325 122 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 GLCEO94923 617 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 GALP22466 123 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 GDF1P27539 372 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 CASRP41180 1078 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 RPS27P42677 84 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 CLDN20P56880 219 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ARG2P78540 354 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 TRAM1Q15629 374 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SLC25A53Q5H9E4 307 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 HBMQ6B0K9 141 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SFXN4Q6P4A7 337 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 PLXDC2Q6UX71 529 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 FAM122BQ7Z309 247 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 IZUMO1Q8IYV9 350 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 DND1Q8IYX4 353 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 OR2M7Q8NG81 312 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 STK35Q8TDR2 534 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 GCDHQ92947 438 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 DDIT4LQ96D03 193 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 TMEM41AQ96HV5 264 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 FOXN4Q96NZ1 517 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 TSPAN32Q96QS1 320 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SOSTQ9BQB4 213 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ST6GALNAC2Q9UJ37 374 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MS4A18H0YCH9 400 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 DCTN6O00399 190 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 PLPP3O14495 311 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 EEF1E1O43324 174 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 CFL1P23528 166 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 EIF2S3P41091 472 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 GGTLC2Q14390 218 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 CDK5R1Q15078 307 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MS4A18Q3C1V0 323 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 C3orf33Q6P1S2 294 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ZNF767PQ75MW2 155 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 KRT74Q7RTS7 529 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MS4A15Q8N5U1 240 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SMIM19Q96E16 107 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 OR14A2Q96R54 314 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ABHD1Q96SE0 405 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SYT4Q9H2B2 425 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ZFP64Q9NPA5 681 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ABI3Q9P2A4 366 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SLC6A5Q9Y345 797 aa11.33□□□□□ -0.6
CDK5RAP3-217ENST00000580287 OR5H15A6NDH6 313 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ANKRD61A6NGH8 418 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 LIPT2A6NK58 231 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 NOS1APO75052 506 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 WISP2O76076 250 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 GPANK1O95872 356 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 TALDO1P37837 337 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MAGEA5P43359 124 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 RRADP55042 308 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 CDONQ4KMG0 1287 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SLC35D3Q5M8T2 416 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SYS1Q8N2H4 156 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 GTPBP8Q8N3Z3 284 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MRPL48Q96GC5 212 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ADAD1Q96M93 576 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 GPX7Q96SL4 187 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 EMC6Q9BV81 110 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 NMNAT2Q9BZQ4 307 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SERINC1Q9NRX5 453 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MCUBQ9NWR8 336 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 MED29Q9NX70 200 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ZMAT5Q9UDW3 170 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SSUH2Q9Y2M2 353 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 KCNMB2Q9Y691 235 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 NCKAP5O14513 1909 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 TRAV6A0A075B6T7 132 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 XKRYO14609 159 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ZNHIT1O43257 154 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 ZNF208O43345 1280 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 OR6A2O95222 327 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 SERPINA3P01011 423 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 HLA-DQA2P01906 255 aa11.32□□□□□ -0.6
CDK5RAP3-217ENST00000580287 OR8G3PP0DMU2 310 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms