RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 ANXA8P13928 327 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF14P17017 642 aaPredicted RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 GSTM3P21266 225 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 CRYGSP22914 178 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 AHCYP23526 432 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 PEX2P28328 305 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 GTF2E2P29084 291 aaKnown RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC6A6P31641 620 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 IFNA8P32881 189 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 GRK5P34947 590 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 GGT2P36268 569 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 ACVR1BP36896 505 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 GIPRP48546 466 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 CSNK1A1P48729 337 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 RPS6KA3P51812 740 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 CRISP1P54107 249 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 MRPS34P82930 218 aaKnown RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 ARF1P84077 181 aaKnown RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 MYBPC1Q00872 1141 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 HGFACQ04756 655 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 FAPQ12884 760 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 TOP3AQ13472 1001 aaPredicted RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 RIPK1Q13546 671 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 DAG1Q14118 895 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 CRMP1Q14194 572 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 DAZAP2Q15038 168 aaPredicted RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 PTGES3Q15185 160 aaKnown RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 RCN1Q15293 331 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 PCK2Q16822 640 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 RSPO1Q2MKA7 263 aaPredicted RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 CEACAM16Q2WEN9 425 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 KRTAP27-1Q3LI81 207 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 TBRG1Q3YBR2 411 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 NRN1LQ496H8 165 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 HIKESHIQ53FT3 197 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 TMEM255AQ5JRV8 349 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 TIMM23BQ5SRD1 257 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 AADACL4Q5VUY2 407 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 TMEM236Q5W0B7 351 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 OTPQ5XKR4 325 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 FAM205BPQ63HN1 556 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 LPCAT4Q643R3 524 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 GPR139Q6DWJ6 353 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 LAIR2Q6ISS4 152 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 PPP4R4Q6NUP7 873 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 RPL13AP3Q6NVV1 102 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 UGT2A3Q6UWM9 527 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 B3GLCTQ6Y288 498 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 BHLHA15Q7RTS1 189 aaPredicted RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 ADCK1Q86TW2 530 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 STK32CQ86UX6 486 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 HIPK1Q86Z02 1210 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 MCEMP1Q8IX19 187 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 SKA3Q8IX90 412 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 OR6V1Q8N148 313 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 GPR137CQ8N3F9 429 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 C17orf78Q8N4C9 275 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 CBR4Q8N4T8 237 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 C10orf53Q8N6V4 93 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 SYT14Q8NB59 555 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC37A3Q8NCC5 494 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 SDR9C7Q8NEX9 313 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC26A10Q8NG04 563 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 OR10S1Q8NGN2 331 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 LINC01560Q8TB33 94 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 DNAJC9Q8WXX5 260 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 PTP4A1Q93096 173 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF566Q969W8 418 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 FBXO17Q96EF6 278 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 C14orf79Q96F83 325 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF570Q96NI8 536 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 ERMAPQ96PL5 475 aaPredicted RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 NMNAT3Q96T66 252 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 FOXB1Q99853 325 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 TSSK6Q9BXA6 273 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 POLDIP3Q9BY77 421 aaKnown RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 ACTR6Q9GZN1 396 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 NUAK2Q9H093 628 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 RACGAP1Q9H0H5 632 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 SYT4Q9H2B2 425 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 FN3KQ9H479 309 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 YY1AP1Q9H869 796 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 RNPEPL1Q9HAU8 725 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 CRLF2Q9HC73 371 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 PNRC2Q9NPJ4 139 aaKnown RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 HINT3Q9NQE9 182 aaKnown RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 TMEM38BQ9NVV0 291 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 PARPBPQ9NWS1 579 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 MRPL22Q9NWU5 206 aaKnown RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 ASB6Q9NWX5 421 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 C6orf203Q9P0P8 240 aaPredicted RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 STX18Q9P2W9 335 aaKnown RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 NDRG4Q9ULP0 352 aaKnown RBP3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 TMCC3Q9ULS5 477 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 PLA2G2DQ9UNK4 145 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 POFUT2Q9Y2G5 429 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 GPR52Q9Y2T5 361 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 IER3IP1Q9Y5U9 82 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 DOCK11Q5JSL3 2073 aa3.29□□□□□ -1.88
SMARCE1-215ENST00000578995 USF3Q68DE3 2245 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms