RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 PABPC1L2AQ5JQF8 200 aa12.04□□□□□ -0.48
SNORD3B-1-201ENST00000577988 KDM4DQ6B0I6 523 aa12.04□□□□□ -0.48
SNORD3B-1-201ENST00000577988 UNQ6126/PRO20091Q6UXV3 157 aa12.04□□□□□ -0.48
SNORD3B-1-201ENST00000577988 C1orf174Q8IYL3 243 aa12.04□□□□□ -0.48
SNORD3B-1-201ENST00000577988 SLC37A3Q8NCC5 494 aa12.04□□□□□ -0.48
SNORD3B-1-201ENST00000577988 SLC30A7Q8NEW0 376 aa12.04□□□□□ -0.48
SNORD3B-1-201ENST00000577988 SDR9C7Q8NEX9 313 aa12.04□□□□□ -0.48
SNORD3B-1-201ENST00000577988 NEUROG1Q92886 237 aa12.04□□□□□ -0.48
SNORD3B-1-201ENST00000577988 FBXO17Q96EF6 278 aa12.04□□□□□ -0.48
SNORD3B-1-201ENST00000577988 RBM4Q9BWF3 364 aaKnown RBP12.04□□□□□ -0.48
SNORD3B-1-201ENST00000577988 ZNF416Q9BWM5 594 aa12.04□□□□□ -0.48
SNORD3B-1-201ENST00000577988 OR2H1Q9GZK4 316 aa12.04□□□□□ -0.48
SNORD3B-1-201ENST00000577988 SLC25A19Q9HC21 320 aa12.04□□□□□ -0.48
SNORD3B-1-201ENST00000577988 S100A14Q9HCY8 104 aa12.04□□□□□ -0.48
SNORD3B-1-201ENST00000577988 KCNG2Q9UJ96 466 aa12.04□□□□□ -0.48
SNORD3B-1-201ENST00000577988 ARFGEF3Q5TH69 2177 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 MYO9AB2RTY4 2548 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 H3BNX3 289 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 DCTN6O00399 190 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 SMPD2O60906 423 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 PAICSP22234 425 aaKnown RBP12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 POU1F1P28069 291 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 PCSK6P29122 969 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 GLRXP35754 106 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 RPS23P62266 143 aaKnown RBP12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 NKX6-1P78426 367 aaPredicted RBP12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 HGFACQ04756 655 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 DAG1Q14118 895 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 B3GLCTQ6Y288 498 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 MYPOPQ86VE0 399 aaPredicted RBP12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 ZNF584Q8IVC4 421 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 MUC15Q8N387 334 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 SLC26A10Q8NG04 563 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 IPCEF1Q8WWN9 437 aaPredicted RBP12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 C11orf40Q8WZ69 217 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 HTRA1Q92743 480 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 MS4A3Q96HJ5 214 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 TSSK2Q96PF2 358 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 RBM4BQ9BQ04 359 aaKnown RBP12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 TRAF4Q9BUZ4 470 aaPredicted RBP12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 PRRG3Q9BZD7 231 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 NMNAT2Q9BZQ4 307 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 CXXC4Q9H2H0 198 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 CDH20Q9HBT6 801 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 CA10Q9NS85 328 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 KRT84Q9NSB2 600 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 CBLN4Q9NTU7 201 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 ZNF701Q9NV72 531 aaPredicted RBP12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 ATPIF1Q9UII2 106 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 NDRG4Q9ULP0 352 aaKnown RBP12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 LAMP3Q9UQV4 416 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 PDZD2O15018 2839 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 HRNRQ86YZ3 2850 aaPredicted RBP12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 MAST4O15021 2626 aa12.03□□□□□ -0.48
SNORD3B-1-201ENST00000577988 PRRC2AP48634 2157 aaKnown RBP12.02□□□□□ -0.48
SNORD3B-1-201ENST00000577988 OVOL3O00110 214 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 SCG5P05408 212 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 GAAP10253 952 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 STOMP27105 288 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 RAD52P43351 418 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 GDI2P50395 445 aaKnown RBP12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 TEKQ02763 1124 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 CRMP1Q14194 572 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 ACSM5Q6NUN0 579 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 UGT2A3Q6UWM9 527 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 CYB561A3Q8NBI2 242 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 CPEB3Q8NE35 698 aaKnown RBP12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 GJC3Q8NFK1 279 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 OR10H5Q8NGA6 315 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 STMN2Q93045 179 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 TRMT61AQ96FX7 289 aaKnown RBP12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 PKP2Q99959 881 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 GSX2Q9BZM3 304 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 BCL2L14Q9BZR8 327 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 WNT5BQ9H1J7 359 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 SEMA6AQ9H2E6 1030 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 EMC7Q9NPA0 242 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 EIF3KQ9UBQ5 218 aaKnown RBP12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 OAZ3Q9UMX2 235 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 POLR1DQ9Y2S0 133 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 TACC2O95359 2948 aa12.02□□□□□ -0.49
SNORD3B-1-201ENST00000577988 B9A039 149 aa12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 SGCEO43556 437 aa12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 CD8AP01732 235 aa12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 HLA-DQA2P01906 255 aa12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 SOD3P08294 240 aa12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 ZNF823P16415 610 aa12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 TUBG1P23258 451 aa12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 APEX1P27695 318 aaKnown RBP12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 FMO3P31513 532 aa12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 SERPINF1P36955 418 aa12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 EVX1P49640 407 aa12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 ART1P52961 327 aa12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 HIST1H3AP68431 136 aa12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 SNTB2Q13425 540 aaKnown RBP12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 PTGES3Q15185 160 aaKnown RBP12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 EFNB3Q15768 340 aa12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 HIST2H3PS2Q5TEC6 136 aa12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 SHEQ5VZ18 495 aa12.01□□□□□ -0.49
SNORD3B-1-201ENST00000577988 ARL9Q6T311 187 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms