RNA–Protein interactions for RNA: ENST00000576019.5

VPS53-219, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-219ENST00000576019 OR51M1Q9H341 326 aa4.74□□□□□ -1.65
VPS53-219ENST00000576019 IL26Q9NPH9 171 aa4.74□□□□□ -1.65
VPS53-219ENST00000576019 IFNKQ9P0W0 207 aa4.74□□□□□ -1.65
VPS53-219ENST00000576019 KCNG2Q9UJ96 466 aa4.74□□□□□ -1.65
VPS53-219ENST00000576019 KCNIP3Q9Y2W7 256 aa4.74□□□□□ -1.65
VPS53-219ENST00000576019 FBXO7Q9Y3I1 522 aa4.74□□□□□ -1.65
VPS53-219ENST00000576019 KCNE1BA0A087WTH5 132 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 NSG1A0A0A6YYJ2 146 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 GOLGA8QA0A0J9YX86 632 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 PLSCR5A0PG75 271 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 CCDC182A6NF36 153 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 IGLON5A6NGN9 336 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 LRRIQ3A6PVS8 624 aaPredicted RBP4.73□□□□□ -1.65
VPS53-219ENST00000576019 PDZK1P1A8MUH7 402 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 G3V2L1 256 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 OR10H3O60404 316 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 HCN1O60741 890 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 RAMP1O60894 148 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 FCN3O75636 299 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 IGHV4-34P06331 123 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 FCGR3AP08637 254 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 GOLGA8HP0CJ92 632 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 ABOP16442 354 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 NSG1P42857 185 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 TMEM50BP56557 158 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 LCN2P80188 198 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 SCRN3Q0VDG4 424 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 FASTKQ14296 549 aaKnown RBP4.73□□□□□ -1.65
VPS53-219ENST00000576019 GPR107Q5VW38 600 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 FOXL2NBQ6ZUU3 175 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 TMEM150AQ86TG1 271 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 RBM45Q8IUH3 476 aaKnown RBP4.73□□□□□ -1.65
VPS53-219ENST00000576019 MTURNQ8N3F0 131 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 ZNF781Q8N8C0 355 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 SAMD12Q8N8I0 201 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 C8orf31Q8N9H6 132 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 OR4D6Q8NGJ1 314 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 ANGPTL6Q8NI99 470 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 GPR151Q8TDV0 419 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 ZBED6CLQ96FA7 236 aaPredicted RBP4.73□□□□□ -1.65
VPS53-219ENST00000576019 TRNT1Q96Q11 434 aaKnown RBP4.73□□□□□ -1.65
VPS53-219ENST00000576019 ATP5SQ99766 215 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 PITPNM3Q9BZ71 974 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 RACGAP1Q9H0H5 632 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 ELL3Q9HB65 397 aaPredicted RBP4.73□□□□□ -1.65
VPS53-219ENST00000576019 ZNF275Q9NSD4 429 aaPredicted RBP4.73□□□□□ -1.65
VPS53-219ENST00000576019 GPATCH2LQ9NWQ4 482 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 ZNF229Q9UJW7 825 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 COX11Q9Y6N1 276 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 CACNA1CQ13936 2221 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 SACSQ9NZJ4 4579 aa4.73□□□□□ -1.65
VPS53-219ENST00000576019 MYO7BQ6PIF6 2116 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 IGHV3-20A0A0C4DH32 117 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 RAB19A4D1S5 217 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 TLCD2A6NGC4 264 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 I3L4J1 428 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 M0R3G1 203 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 GOSR2O14653 212 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 HSD17B6O14756 317 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 PPP1R2P9O14990 202 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 TRAPPC3O43617 180 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 PRKYO43930 277 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 VENTXO95231 258 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 NUDT14O95848 222 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 PRPS2P11908 318 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 RNH1P13489 461 aaKnown RBP4.72□□□□□ -1.65
VPS53-219ENST00000576019 CD38P28907 300 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 CFHR2P36980 270 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 SPAM1P38567 509 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 TSFMP43897 325 aaKnown RBP4.72□□□□□ -1.65
VPS53-219ENST00000576019 TMED10P49755 219 aaKnown RBP4.72□□□□□ -1.65
VPS53-219ENST00000576019 DAP3P51398 398 aaKnown RBP4.72□□□□□ -1.65
VPS53-219ENST00000576019 PRKXP51817 358 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 ZNF154Q13106 437 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 KIAA0141Q14154 515 aaPredicted RBP4.72□□□□□ -1.65
VPS53-219ENST00000576019 KLHL22Q53GT1 634 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 XKR4Q5GH76 650 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 FAM219BQ5XKK7 198 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 SPECC1LQ69YQ0 1117 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 ULK3Q6PHR2 472 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 ZNF836Q6ZNA1 936 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 MBOAT1Q6ZNC8 495 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 PGAP1Q75T13 922 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 NUFIP2Q7Z417 695 aaKnown RBP4.72□□□□□ -1.65
VPS53-219ENST00000576019 NUDCD3Q8IVD9 361 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 ZNF100Q8IYN0 542 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 Q8N1X5 172 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 MS4A15Q8N5U1 240 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 OR52B6Q8NGF0 335 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 FNDC8Q8TC99 324 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 CAPSLQ8WWF8 208 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 CCDC126Q96EE4 140 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 KCNA7Q96RP8 456 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 CYTH2Q99418 400 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 ZNF670Q9BS34 389 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 SYT11Q9BT88 431 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 RAB1BQ9H0U4 201 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 RBKSQ9H477 322 aa4.72□□□□□ -1.65
VPS53-219ENST00000576019 NXF3Q9H4D5 531 aaKnown RBP4.72□□□□□ -1.65
VPS53-219ENST00000576019 NIPAL2Q9H841 368 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms