RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 CGAP01215 116 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 CTSSP25774 331 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 CA7P43166 264 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 ARF1P84077 181 aaKnown RBP21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 TBCEQ15813 527 aaPredicted RBP21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 RNLSQ5VYX0 342 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 CORO6Q6QEF8 472 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 LRRC18Q8N456 261 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 C12orf43Q96C57 262 aaKnown RBP21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 ZNF416Q9BWM5 594 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 CDADC1Q9BWV3 514 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 OPN3Q9H1Y3 402 aaPredicted RBP21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 PLSCR4Q9NRQ2 329 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 Q9UFV3 132 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 E9PLN8 166 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 ZNF670-ZNF695F2Z2N8 137 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 LCKP06239 509 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 PCSK6P29122 969 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 DOC2BQ14184 412 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 OR2G6Q5TZ20 316 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 ABHD12BQ7Z5M8 362 aaPredicted RBP21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 NANOGP1Q8N7R0 232 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 THEM6Q8WUY1 208 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 AMELYQ99218 206 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 DOK1Q99704 481 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 VKORC1Q9BQB6 163 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 SFXN3Q9BWM7 321 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 MEMO1Q9Y316 297 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 LHFPL6Q9Y693 200 aa21.13■□□□□ 0.97
ATPAF1-213ENST00000574428 COL6A6A6NMZ7 2263 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 PRR32B1ATL7 298 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 MAGEB4O15481 346 aaPredicted RBP21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 ITGA5P08648 1049 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 ALOX5APP20292 161 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 NPR2P20594 1047 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 EIF2B1Q14232 305 aaKnown RBP21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 ENDOGQ14249 297 aaKnown RBP21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 GALEQ14376 348 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 PCK2Q16822 640 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 TEX30Q5JUR7 227 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 KLHL24Q6TFL4 600 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 ZNF813Q6ZN06 617 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 ALDH16A1Q8IZ83 802 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 ZNF610Q8N9Z0 462 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 RORBQ92753 470 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 OR5M11Q96RB7 305 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 DMRTA2Q96SC8 542 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 SH3GL3Q99963 347 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 MND1Q9BWT6 205 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 SIAEQ9HAT2 523 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 ASH2LQ9UBL3 628 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 CYB5R1Q9UHQ9 305 aa21.12■□□□□ 0.97
ATPAF1-213ENST00000574428 H3BMQ9 156 aa21.11■□□□□ 0.97
ATPAF1-213ENST00000574428 STK11Q15831 433 aa21.11■□□□□ 0.97
ATPAF1-213ENST00000574428 SLC22A24Q8N4F4 322 aa21.11■□□□□ 0.97
ATPAF1-213ENST00000574428 COG8Q96MW5 612 aa21.11■□□□□ 0.97
ATPAF1-213ENST00000574428 MNTQ99583 582 aa21.11■□□□□ 0.97
ATPAF1-213ENST00000574428 ISG20L2Q9H9L3 353 aaKnown RBP21.11■□□□□ 0.97
ATPAF1-213ENST00000574428 LSM2Q9Y333 95 aaKnown RBP21.11■□□□□ 0.97
ATPAF1-213ENST00000574428 TMEM14AQ9Y6G1 99 aa21.11■□□□□ 0.97
ATPAF1-213ENST00000574428 TMEM129A0AVI4 362 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 PSMD9O00233 223 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 IL18BPO95998 194 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 WNT11O96014 354 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 PRB1P04280 392 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 MPGP29372 298 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 PEX19P40855 299 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 LSM6P62312 80 aaKnown RBP21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 FAM27BQ5VT28 67 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 SLC18B1Q6NT16 456 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 ZNF322Q6U7Q0 402 aaPredicted RBP21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 Q6ZT83 130 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 DCXRQ7Z4W1 244 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 KLHL36Q8N4N3 616 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 ZFYVE26Q68DK2 2539 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 A0A096LPE4 126 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 A0A1W2PPZ6 126 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 HSPB2A8KAH6 182 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 TMCC2O75069 709 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 BMP5P22003 454 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 MED22Q15528 200 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 HSPB2Q16082 182 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 SPATC1Q76KD6 591 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 ZNF454Q8N9F8 522 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 SNX33Q8WV41 574 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 GATAD2BQ8WXI9 593 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 ABHD6Q9BV23 337 aa21.1■□□□□ 0.97
ATPAF1-213ENST00000574428 CFAP46Q8IYW2 2715 aa21.09■□□□□ 0.97
ATPAF1-213ENST00000574428 INTS1Q8N201 2190 aaKnown RBP21.09■□□□□ 0.97
ATPAF1-213ENST00000574428 CD8BP10966 210 aa21.09■□□□□ 0.97
ATPAF1-213ENST00000574428 IGHV1-2P23083 117 aa21.09■□□□□ 0.97
ATPAF1-213ENST00000574428 TMBIM6P55061 237 aa21.09■□□□□ 0.97
ATPAF1-213ENST00000574428 TLE1Q04724 770 aa21.09■□□□□ 0.97
ATPAF1-213ENST00000574428 TP53I3Q53FA7 332 aa21.09■□□□□ 0.97
ATPAF1-213ENST00000574428 SYT6Q5T7P8 510 aaPredicted RBP21.09■□□□□ 0.97
ATPAF1-213ENST00000574428 CFAP77Q6ZQR2 320 aa21.09■□□□□ 0.97
ATPAF1-213ENST00000574428 ST7LQ8TDW4 575 aa21.09■□□□□ 0.97
ATPAF1-213ENST00000574428 SPRYD4Q8WW59 207 aaPredicted RBP21.09■□□□□ 0.97
ATPAF1-213ENST00000574428 C4orf36Q96KX1 117 aa21.09■□□□□ 0.97
ATPAF1-213ENST00000574428 GDF2Q9UK05 429 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms