RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 PPIHO43447 177 aaKnown RBP9.66□□□□□ -0.86
RPAIN-214ENST00000574003 ATP8B1O43520 1251 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 RP2O75695 350 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 CST2P09228 141 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 MSR1P21757 451 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 RAD52P43351 418 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 GDI2P50395 445 aaKnown RBP9.66□□□□□ -0.86
RPAIN-214ENST00000574003 RAP1BP61224 184 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 RAP1AP62834 184 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 TAF11Q15544 211 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 PTCHD4Q6ZW05 846 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 RRM2BQ7LG56 351 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 DPPA2Q7Z7J5 298 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.66□□□□□ -0.86
RPAIN-214ENST00000574003 CYP4Z1Q86W10 505 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 ABHD4Q8TB40 342 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 IPCEF1Q8WWN9 437 aaPredicted RBP9.66□□□□□ -0.86
RPAIN-214ENST00000574003 RSRC1Q96IZ7 334 aaKnown RBP9.66□□□□□ -0.86
RPAIN-214ENST00000574003 ZNF570Q96NI8 536 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 FUZQ9BT04 418 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 BCL2L14Q9BZR8 327 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 OR2J1Q9GZK6 312 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 LRMDAQ9H2I8 198 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 C1orf198Q9H425 327 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 POLE4Q9NR33 117 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 TMEM160Q9NX00 188 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 GRHPRQ9UBQ7 328 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 RPS6KA6Q9UK32 745 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 FBXO9Q9UK97 447 aaPredicted RBP9.66□□□□□ -0.86
RPAIN-214ENST00000574003 SIGLEC7Q9Y286 467 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 FAM32AQ9Y421 112 aaKnown RBP9.66□□□□□ -0.86
RPAIN-214ENST00000574003 IER3IP1Q9Y5U9 82 aa9.66□□□□□ -0.86
RPAIN-214ENST00000574003 PRSS37A4D1T9 235 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 ZSCAN5BA6NJL1 495 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 SPRY3O43610 288 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 PPP1R3DO95685 299 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 PTHP01270 115 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 IFNA2P01563 188 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 SRD5A1P18405 259 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 RHCEP18577 417 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 ACHEP22303 614 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 CDKN2AP42771 156 aaKnown RBP9.65□□□□□ -0.86
RPAIN-214ENST00000574003 CDH15P55291 814 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 PPP1CBP62140 327 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 MVKQ03426 396 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 KRR1Q13601 381 aaKnown RBP9.65□□□□□ -0.86
RPAIN-214ENST00000574003 FAM205BPQ63HN1 556 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 TMEM154Q6P9G4 183 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 USP51Q70EK9 711 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 LINC01356Q8N9X3 169 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 SNX33Q8WV41 574 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 MARS2Q96GW9 593 aaKnown RBP9.65□□□□□ -0.86
RPAIN-214ENST00000574003 TSSK2Q96PF2 358 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 CDRT15Q96T59 188 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 NSRP1Q9H0G5 558 aaKnown RBP9.65□□□□□ -0.86
RPAIN-214ENST00000574003 SYT4Q9H2B2 425 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 DCAF16Q9NXF7 216 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 CD300AQ9UGN4 299 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 COA3Q9Y2R0 106 aaPredicted RBP9.65□□□□□ -0.86
RPAIN-214ENST00000574003 TIMM10BQ9Y5J6 103 aa9.65□□□□□ -0.86
RPAIN-214ENST00000574003 A0A1W2PRQ8 180 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 HTR3EA5X5Y0 456 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 UNC119BA6NIH7 251 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 DCTN6O00399 190 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 NDUFAB1O14561 156 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 XKRYO14609 159 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 ARPC2O15144 300 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 TPD52L2O43399 206 aaKnown RBP9.64□□□□□ -0.87
RPAIN-214ENST00000574003 SLC16A7O60669 478 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 NDUFB2O95178 105 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 IGHV1-46P01743 117 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 IGHV3-13P01766 116 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 SEMG1P04279 462 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 ERFP50548 548 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 SELENOVP59797 346 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 SPIBQ01892 262 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 DGCR6Q14129 220 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 MEP1BQ16820 701 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 KRTAP24-1Q3LI83 254 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 C1orf94Q6P1W5 598 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 RINLQ6ZS11 566 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 ZER1Q7Z7L7 766 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 KLF14Q8TD94 323 aaPredicted RBP9.64□□□□□ -0.87
RPAIN-214ENST00000574003 PYURFQ96I23 114 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 DHRS1Q96LJ7 313 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 C4orf45Q96LM5 186 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 RACGAP1Q9H0H5 632 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 ANKRD19PQ9H560 264 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 MSL2Q9HCI7 577 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 SLCO1C1Q9NYB5 712 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 EIF3KQ9UBQ5 218 aaKnown RBP9.64□□□□□ -0.87
RPAIN-214ENST00000574003 LPAR3Q9UBY5 353 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 TAGLN3Q9UI15 199 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 SAMD4AQ9UPU9 718 aaKnown RBP9.64□□□□□ -0.87
RPAIN-214ENST00000574003 AURKCQ9UQB9 309 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 TMEM5Q9Y2B1 443 aa9.64□□□□□ -0.87
RPAIN-214ENST00000574003 C12orf71A8MTZ7 269 aa9.63□□□□□ -0.87
RPAIN-214ENST00000574003 DOK2O60496 412 aa9.63□□□□□ -0.87
RPAIN-214ENST00000574003 GMNNO75496 209 aa9.63□□□□□ -0.87
RPAIN-214ENST00000574003 DBHP09172 617 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms