RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SCPEP1Q9HB40 452 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 FBXO4Q9UKT5 387 aa14.08□□□□□ -0.16
NUP88-207ENST00000573584 A0A0D9SG52 128 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 A0A1B0GW55 424 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 ZNF736B4DX44 427 aaPredicted RBP14.07□□□□□ -0.16
NUP88-207ENST00000573584 SLC25A12O75746 678 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 UBBP0CG47 229 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 UBCP0CG48 685 aaKnown RBP14.07□□□□□ -0.16
NUP88-207ENST00000573584 DUX4L2P0CJ85 424 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 DUX4L3P0CJ86 424 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 DUX4L4P0CJ87 422 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 DUX4L5P0CJ88 424 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 DUX4L6P0CJ89 424 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 DUX4L7P0CJ90 424 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 GALNSP34059 522 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 RORAP35398 523 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 PPM1FP49593 454 aaPredicted RBP14.07□□□□□ -0.16
NUP88-207ENST00000573584 RIDAP52758 137 aaKnown RBP14.07□□□□□ -0.16
NUP88-207ENST00000573584 RPS27AP62979 156 aaKnown RBP14.07□□□□□ -0.16
NUP88-207ENST00000573584 UBA52P62987 128 aaKnown RBP14.07□□□□□ -0.16
NUP88-207ENST00000573584 FGL1Q08830 312 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 FZD2Q14332 565 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 ZMYND11Q15326 602 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 FAM74A1Q5RGS3 127 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 CMKLR1Q99788 373 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 TMEM185BQ9H7F4 350 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 PRMT8Q9NR22 394 aaPredicted RBP14.07□□□□□ -0.16
NUP88-207ENST00000573584 DUX4Q9UBX2 424 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 MSRAQ9UJ68 235 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 MRTO4Q9UKD2 239 aaKnown RBP14.07□□□□□ -0.16
NUP88-207ENST00000573584 VCANP13611 3396 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 ARPC4-TTLL3A0A0A6YYG9 625 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 CDC14CA4D256 554 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 WISP1O95388 367 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 THEGLP0DJG4 465 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 CTLA4P16410 223 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 MAOBP27338 520 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 CD1CP29017 333 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 DHRS2Q13268 280 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 EIF2B1Q14232 305 aaKnown RBP14.07□□□□□ -0.16
NUP88-207ENST00000573584 COL13A1Q5TAT6 717 aaPredicted RBP14.07□□□□□ -0.16
NUP88-207ENST00000573584 ATRAIDQ6UW56 229 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 TMEM151BQ8IW70 566 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 BPIFB2Q8N4F0 458 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 OR51A2Q8NGJ7 313 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 EDAQ92838 391 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 FBXW5Q969U6 566 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 C8orf44Q96CB5 159 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 ZNF587Q96SQ5 575 aaPredicted RBP14.07□□□□□ -0.16
NUP88-207ENST00000573584 ABHD6Q9BV23 337 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 SLCO5A1Q9H2Y9 848 aa14.07□□□□□ -0.16
NUP88-207ENST00000573584 GPN3Q9UHW5 284 aaPredicted RBP14.07□□□□□ -0.16
NUP88-207ENST00000573584 CD8AP01732 235 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 IGHV4-34P06331 123 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 ZNF28P17035 718 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 OR10K2Q6IF99 312 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 LIN54Q6MZP7 749 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 C17orf107Q6ZR85 190 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 MARCH3Q86UD3 253 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 CATSPERDQ86XM0 798 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 JAGN1Q8N5M9 183 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 OR5M8Q8NGP6 311 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 PTDSS2Q9BVG9 487 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 NRSN2Q9GZP1 204 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 RASL12Q9NYN1 266 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 LRP12Q9Y561 859 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 FRG2CA6NGY1 282 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 DOK2O60496 412 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 CSN2P05814 226 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 ZNF735P0CB33 412 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 CD34P28906 385 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 STARP49675 285 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 SPOCK1Q08629 439 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 PMPCAQ10713 525 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 TAF13Q15543 124 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 SGCBQ16585 318 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 LRRC37A5PQ49AS3 106 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 ADGRE4PQ86SQ3 457 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 ZNF519Q8TB69 540 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 CDCA3Q99618 268 aaPredicted RBP14.06□□□□□ -0.16
NUP88-207ENST00000573584 PDCD10Q9BUL8 212 aa14.06□□□□□ -0.16
NUP88-207ENST00000573584 NOP16Q9Y3C1 178 aaKnown RBP14.06□□□□□ -0.16
NUP88-207ENST00000573584 IGLV1-36A0A0B4J1U3 117 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 KANTRA0A1W2PQU2 76 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 EIF4E2O60573 245 aaKnown RBP14.05□□□□□ -0.16
NUP88-207ENST00000573584 IGFBP3P17936 291 aaPredicted RBP14.05□□□□□ -0.16
NUP88-207ENST00000573584 GABRG2P18507 467 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 DNASE1L1P49184 302 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 MOGAT2Q3SYC2 334 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 PMEPA1Q969W9 287 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 SEC22AQ96IW7 307 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 ARPC5LQ9BPX5 153 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 WDR13Q9H1Z4 485 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 MYOZ1Q9NP98 299 aaPredicted RBP14.05□□□□□ -0.16
NUP88-207ENST00000573584 SOHLH2Q9NX45 425 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 PLCL2Q9UPR0 1127 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 SPTBN5Q9NRC6 3674 aaKnown RBP14.05□□□□□ -0.16
NUP88-207ENST00000573584 LRP4O75096 1905 aa14.05□□□□□ -0.16
NUP88-207ENST00000573584 HLA-AP01891 365 aaKnown RBP14.05□□□□□ -0.16
NUP88-207ENST00000573584 IL12BP29460 328 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms