RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 FRYLO94915 3013 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 UBE2QL1A1L167 161 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 OR2M5A3KFT3 312 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 PIAS2O75928 621 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 OR2A4O95047 310 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 CD2P06729 351 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 EPHA4P54764 986 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 FBXW4P57775 412 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 NXPH1P58417 271 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 RAB14P61106 215 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 RAP2BP61225 183 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 SFRP5Q5T4F7 317 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 CORO6Q6QEF8 472 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 SLC36A1Q7Z2H8 476 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 PLXDC1Q8IUK5 500 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 JAGN1Q8N5M9 183 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 ZNF441Q8N8Z8 693 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 TNFAIP8L1Q8WVP5 186 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 OR2A7Q96R45 310 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 GSX2Q9BZM3 304 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 MED29Q9NX70 200 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 TAS2R8Q9NYW2 309 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 AUP1Q9Y679 476 aa10.07□□□□□ -0.8
RPAIN-212ENST00000573126 IGKV1D-43A0A0B4J1Z2 117 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 LOC101059948A0A1B0GTJ6 334 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 A0A1W2PPL8 197 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 SHISA8B8ZZ34 492 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 GOSR2O14653 212 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 DUX1O43812 170 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 LMX1BO60663 402 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 AKAIN1P0CW23 69 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 ZNF35P13682 527 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 HTR2CP28335 458 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 MECP2P51608 486 aaKnown RBP10.06□□□□□ -0.8
RPAIN-212ENST00000573126 SLC26A5P58743 744 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 OR7A5Q15622 319 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 C4orf46Q504U0 113 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 DCAF12L2Q5VW00 463 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 SIGIRRQ6IA17 410 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 FAM166AQ6J272 317 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 DCXRQ7Z4W1 244 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 CATSPERDQ86XM0 798 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 D2HGDHQ8N465 521 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 CLEC1AQ8NC01 280 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 OR6N1Q8NGY5 312 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 MSANTD3Q96H12 275 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 NUDT22Q9BRQ3 303 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 C1QTNF6Q9BXI9 259 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 FOXQ1Q9C009 403 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 SUSD2Q9UGT4 822 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 OPN4Q9UHM6 478 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 ASCC3Q8N3C0 2202 aaKnown RBP10.06□□□□□ -0.8
RPAIN-212ENST00000573126 FXYD6-FXYD2A0A087WZ82 144 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 M0QYG6 137 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 EIF1AYO14602 144 aaKnown RBP10.06□□□□□ -0.8
RPAIN-212ENST00000573126 SRFP11831 508 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 AP2S1P53680 142 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-212ENST00000573126 DLX5P56178 289 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 RNF4P78317 190 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 STEAP1BQ6NZ63 245 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 C11orf88Q6PI97 169 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 FAM198BQ6UWH4 519 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 ARSKQ6UWY0 536 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-212ENST00000573126 OR13C3Q8NGS6 347 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 SLC25A28Q96A46 364 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 SLC41A2Q96JW4 573 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 CMKLR1Q99788 373 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 FXYD6Q9H0Q3 95 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 EXO5Q9H790 373 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 PRMT8Q9NR22 394 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-212ENST00000573126 COQ3Q9NZJ6 369 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 LOC107986453A0A1B0GWG9 222 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 A0A1W2PPC1 479 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 MCRIP1C9JLW8 97 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 FTCDNL1E5RQL4 147 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 H3BML4 177 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 ADAM10O14672 748 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 SMAD9O15198 467 aaKnown RBP10.06□□□□□ -0.8
RPAIN-212ENST00000573126 OR2T1O43869 369 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 POU3F2P20265 443 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-212ENST00000573126 CRABP1P29762 137 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 EIF1AXP47813 144 aaKnown RBP10.06□□□□□ -0.8
RPAIN-212ENST00000573126 ARRB1P49407 418 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-212ENST00000573126 POU3F1Q03052 451 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-212ENST00000573126 IKZF1Q13422 519 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 GLT8D1Q68CQ7 371 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 C3P1Q6ZMU1 363 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 ZNF248Q8NDW4 579 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 THRSPQ92748 146 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 NKD1Q969G9 470 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 SLC7A5P2Q9GIP4 190 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 SLC22A11Q9NSA0 550 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 CENPMQ9NSP4 180 aa10.06□□□□□ -0.8
RPAIN-212ENST00000573126 CNTRLQ7Z7A1 2325 aa10.05□□□□□ -0.8
RPAIN-212ENST00000573126 POM121CA8CG34 1229 aa10.05□□□□□ -0.8
RPAIN-212ENST00000573126 MS4A18H0YCH9 400 aa10.05□□□□□ -0.8
RPAIN-212ENST00000573126 NUDT21O43809 227 aaKnown RBP10.05□□□□□ -0.8
RPAIN-212ENST00000573126 ZNF823P16415 610 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms