RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 RNF114Q9Y508 228 aa8.54□□□□□ -1.04
CHMP6-203ENST00000572525 NPTNQ9Y639 398 aa8.54□□□□□ -1.04
CHMP6-203ENST00000572525 PRAMEF27A3QJZ7 478 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 ISPDA4D126 451 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 HMGN4O00479 90 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 HOXA3O43365 443 aaPredicted RBP8.53□□□□□ -1.04
CHMP6-203ENST00000572525 TPD52L2O43399 206 aaKnown RBP8.53□□□□□ -1.04
CHMP6-203ENST00000572525 HPRP00739 348 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 PTHP01270 115 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 CD55P08174 381 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 IGHV4-38-2P0DP08 117 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 ANXA11P50995 505 aaKnown RBP8.53□□□□□ -1.04
CHMP6-203ENST00000572525 CLDN8P56748 225 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 KRTAP10-3P60369 221 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 PAX2Q02962 417 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 EGR4Q05215 589 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 PIGFQ07326 219 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 RBBP4Q09028 425 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 PMS2P3Q13401 168 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 C1DQ13901 141 aaKnown RBP8.53□□□□□ -1.04
CHMP6-203ENST00000572525 SMU1Q2TAY7 513 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 SLC36A3Q495N2 470 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 GPAT3Q53EU6 434 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 RBM48Q5RL73 367 aaKnown RBP8.53□□□□□ -1.04
CHMP6-203ENST00000572525 C6orf136Q5SQH8 315 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 FAM69AQ5T7M9 428 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 NXNQ6DKJ4 435 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 LRRN1Q6UXK5 716 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 CCDC80Q76M96 950 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 AMIGO2Q86SJ2 522 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 GALNT4Q8N4A0 578 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 KRTCAP2Q8N6L1 136 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 SCAIQ8N9R8 606 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 PAPD5Q8NDF8 572 aaKnown RBP8.53□□□□□ -1.04
CHMP6-203ENST00000572525 TWIST2Q8WVJ9 160 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 CCL17Q92583 94 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 DYRK2Q92630 601 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 GTF3AQ92664 365 aaKnown RBP8.53□□□□□ -1.04
CHMP6-203ENST00000572525 TAF15Q92804 592 aaKnown RBP eCLIP8.53□□□□□ -1.04
CHMP6-203ENST00000572525 PPP1R14AQ96A00 147 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 FAM71F1Q96KD3 344 aaPredicted RBP8.53□□□□□ -1.04
CHMP6-203ENST00000572525 DPY30Q9C005 99 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 EGLN1Q9GZT9 426 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 CYSLTR2Q9NS75 346 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 ASIC5Q9NY37 505 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 ASH2LQ9UBL3 628 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 OR5V1Q9UGF6 321 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 ZDHHC8Q9ULC8 765 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 SNX13Q9Y5W8 968 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 CACNG2Q9Y698 323 aa8.53□□□□□ -1.04
CHMP6-203ENST00000572525 M0R3G1 203 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 ATP6V1G1O75348 118 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 OCM2P0CE71 109 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 OCMP0CE72 109 aaPredicted RBP8.52□□□□□ -1.05
CHMP6-203ENST00000572525 B4GALT1P15291 398 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 MAKP20794 623 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 S100A1P23297 94 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 CD80P33681 288 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 CAPGP40121 348 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 ZNF81P51508 661 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 MMP15P51511 669 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 UCP2P55851 309 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 GABARAPL2P60520 117 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 MS4A2Q01362 244 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 MAD2L1Q13257 205 aaPredicted RBP8.52□□□□□ -1.05
CHMP6-203ENST00000572525 KRR1Q13601 381 aaKnown RBP8.52□□□□□ -1.05
CHMP6-203ENST00000572525 RAB39AQ14964 217 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 ALKBH6Q3KRA9 238 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 NRN1LQ496H8 165 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 ESCO2Q56NI9 601 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 PHYHD1Q5SRE7 291 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 TNFAIP8L2Q6P589 184 aaPredicted RBP8.52□□□□□ -1.05
CHMP6-203ENST00000572525 FIP1L1Q6UN15 594 aaKnown RBP8.52□□□□□ -1.05
CHMP6-203ENST00000572525 Q6YL49 198 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 ZNF620Q6ZNG0 422 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 H1FNTQ75WM6 255 aaPredicted RBP8.52□□□□□ -1.05
CHMP6-203ENST00000572525 CLVS1Q8IUQ0 354 aaPredicted RBP8.52□□□□□ -1.05
CHMP6-203ENST00000572525 PEX5LQ8IYB4 626 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 CLECL1Q8IZS7 167 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 KDM8Q8N371 416 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 DHRSXQ8N5I4 330 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 SLC30A7Q8NEW0 376 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 OR1J2Q8NGS2 313 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 OR6S1Q8NH40 331 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 LINC01006Q8NI28 216 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 GIPC3Q8TF64 312 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 DACT3Q96B18 629 aaPredicted RBP8.52□□□□□ -1.05
CHMP6-203ENST00000572525 KTI12Q96EK9 354 aaPredicted RBP8.52□□□□□ -1.05
CHMP6-203ENST00000572525 SLC41A3Q96GZ6 507 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 PLEKHA8Q96JA3 519 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 TSPAN32Q96QS1 320 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 ADI1Q9BV57 179 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 CDH20Q9HBT6 801 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 TCF7L1Q9HCS4 588 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 HMG20AQ9NP66 347 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 RHBDL2Q9NX52 303 aa8.52□□□□□ -1.05
CHMP6-203ENST00000572525 TRAV40A0A0B4J280 105 aa8.51□□□□□ -1.05
CHMP6-203ENST00000572525 PLSCR5A0PG75 271 aa8.51□□□□□ -1.05
CHMP6-203ENST00000572525 DHRS12A0PJE2 317 aa8.51□□□□□ -1.05
CHMP6-203ENST00000572525 SDHDO14521 159 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms