RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ZSCAN5BA6NJL1 495 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 CENPXA8MT69 81 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 C4orf51C9J302 202 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 H3BNH8 94 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 H3BSA7 217 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 PSMD12O00232 456 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-214ENST00000572365 PLOD2O00469 737 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 XPNPEP2O43895 674 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 CST8O60676 142 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 GALR3O60755 368 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-214ENST00000572365 RAMP1O60894 148 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 TNFSF13O75888 250 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 RCBTB2O95199 551 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 SLC16A8O95907 504 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 PTTG1O95997 202 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 PAHP00439 452 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 GOT2P00505 430 aaKnown RBP4.57□□□□□ -1.68
SF3B3-214ENST00000572365 C1QAP02745 245 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 ATP6V1B1P15313 513 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 PRKACAP17612 351 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 TNNI3P19429 210 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 TBXA2RP21731 343 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 EPHA2P29317 976 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 CD40LGP29965 261 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 FOXN2P32314 431 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 CHRNA7P36544 502 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 MNDAP41218 407 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 GEMP55040 296 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 DIO3P55073 304 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 AQP4P55087 323 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 MYBPC1Q00872 1141 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 ZNF415Q09FC8 603 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 ILF2Q12905 390 aaKnown RBP4.57□□□□□ -1.68
SF3B3-214ENST00000572365 RCAN2Q14206 197 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 CARTPTQ16568 116 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 ZNF181Q2M3W8 571 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 PGGHGQ32M88 737 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 PTRHD1Q6GMV3 140 aaKnown RBP4.57□□□□□ -1.68
SF3B3-214ENST00000572365 FAM166AQ6J272 317 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 CGB2Q6NT52 195 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 MFSD7Q6UXD7 560 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 HSDL2Q6YN16 418 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 MBOAT1Q6ZNC8 495 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 PRUNE1Q86TP1 453 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 ASPGQ86U10 573 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 RAB42Q8N4Z0 105 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 NIPA2Q8N8Q9 360 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 SLC24A4Q8NFF2 622 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 OR1J1Q8NGS3 322 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 VANGL1Q8TAA9 524 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-214ENST00000572365 LHFPL5Q8TAF8 219 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 CAPSLQ8WWF8 208 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 NSMAFQ92636 917 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 TM4SF19Q96DZ7 209 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 ZMYND19Q96E35 227 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-214ENST00000572365 ST6GAL2Q96JF0 529 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 PANX3Q96QZ0 392 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 PKP2Q99959 881 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 GOLPH3Q9H4A6 298 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 A4GALTQ9NPC4 353 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 FARSBQ9NSD9 589 aaKnown RBP4.57□□□□□ -1.68
SF3B3-214ENST00000572365 MRPL39Q9NYK5 338 aaKnown RBP4.57□□□□□ -1.68
SF3B3-214ENST00000572365 SLC7A8Q9UHI5 535 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 ZNF221Q9UK13 617 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 GRID1Q9ULK0 1009 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 BOKQ9UMX3 212 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-214ENST00000572365 SNX24Q9Y343 169 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 SPACA6W5XKT8 324 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 COL7A1Q02388 2944 aa4.57□□□□□ -1.68
SF3B3-214ENST00000572365 IGKV3D-11A0A0A0MRZ8 115 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 A0A0G2JND7 137 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 PNMA8CA0A1B0GUJ8 204 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 TMEM89A2RUT3 159 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 LRP5LA4QPB2 252 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 FRG2CA6NGY1 282 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 C5orf52A6NGY3 159 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 H7C0C1 242 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 OR1F1O43749 312 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 NIPSNAP2O75323 286 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 ETHE1O95571 254 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 YES1P07947 543 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 GZMAP12544 262 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 TIA1P31483 386 aaKnown RBP eCLIP4.56□□□□□ -1.68
SF3B3-214ENST00000572365 RPL21P46778 160 aaKnown RBP4.56□□□□□ -1.68
SF3B3-214ENST00000572365 ATP5OP48047 213 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 RAB25P57735 213 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 ERVFC1-1P60608 527 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 LGALS3BPQ08380 585 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 LOXL1Q08397 574 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-214ENST00000572365 DOC2AQ14183 400 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 KCNJ11Q14654 390 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 MEP1BQ16820 701 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 DGUOKQ16854 277 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 KCTD19Q17RG1 926 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-214ENST00000572365 CTU2Q2VPK5 515 aaKnown RBP4.56□□□□□ -1.68
SF3B3-214ENST00000572365 ZNF791Q3KP31 576 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-214ENST00000572365 PHLDA2Q53GA4 152 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 BEX5Q5H9J7 111 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 NANOGP8Q6NSW7 305 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 ADAM5Q6NVV9 412 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms