RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 TMEM185AQ8NFB2 350 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 OR13C3Q8NGS6 347 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 B3GNT4Q9C0J1 378 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 MSRAQ9UJ68 235 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 HS3ST3A1Q9Y663 406 aa9.71□□□□□ -0.86
CCDC40-207ENST00000572253 DCDC2BA2VCK2 349 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 PRSS37A4D1T9 235 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 OR2AT4A6NND4 320 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 EIF1AYO14602 144 aaKnown RBP9.7□□□□□ -0.86
CCDC40-207ENST00000572253 SMAD9O15198 467 aaKnown RBP9.7□□□□□ -0.86
CCDC40-207ENST00000572253 PLGP00747 810 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-207ENST00000572253 MT-ATP6P00846 226 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 CTSBP07858 339 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 SLC25A4P12235 298 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 CNR1P21554 472 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 IL12BP29460 328 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 GALNSP34059 522 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 EIF1AXP47813 144 aaKnown RBP9.7□□□□□ -0.86
CCDC40-207ENST00000572253 PRKXP51817 358 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 ATXN7L3Q14CW9 347 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-207ENST00000572253 FAM74A1Q5RGS3 127 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 FNDC7Q5VTL7 733 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 RAB12Q6IQ22 244 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 LRFN4Q6PJG9 635 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 C17orf107Q6ZR85 190 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 GALNT16Q8N428 558 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 METTL27Q8N6F8 245 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-207ENST00000572253 ATOH1Q92858 354 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-207ENST00000572253 SLC46A1Q96NT5 459 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 GAL3ST4Q96RP7 486 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 PBX4Q9BYU1 374 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 PIGMQ9H3S5 423 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 PLEKHA6Q9Y2H5 1048 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 MPDZO75970 2070 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 F5H0A9 414 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-207ENST00000572253 ZNF28P17035 718 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 PGCP20142 388 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 DMWDQ09019 674 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 PMPCAQ10713 525 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 CDNFQ49AH0 187 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 ZNF542PQ5EBM4 170 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 LY6G6FQ5SQ64 297 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 PAPD4Q6PIY7 484 aaKnown RBP9.7□□□□□ -0.86
CCDC40-207ENST00000572253 OR13H1Q8NG92 308 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 FGF14Q92915 247 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 FOXN4Q96NZ1 517 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 OR8D2Q9GZM6 311 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 CERS4Q9HA82 394 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 CGGBP1Q9UFW8 167 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-207ENST00000572253 TNFSF18Q9UNG2 199 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 TMEM150CB9EJG8 249 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 PRKNO60260 465 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-207ENST00000572253 CA3P07451 260 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 ZNF823P16415 610 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 PRKACAP17612 351 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 FSTP19883 344 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 FLI1Q01543 452 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-207ENST00000572253 FAM166AQ6J272 317 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 FOXRED1Q96CU9 486 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-207ENST00000572253 MRGPRX1Q96LB2 322 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 ADOQ96SZ5 270 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 PHB2Q99623 299 aa9.7□□□□□ -0.86
CCDC40-207ENST00000572253 NKX6-2Q9C056 277 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-207ENST00000572253 B4DGG1 531 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 BGLAPP02818 100 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 CD96P40200 585 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 CXADRP78310 365 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 ROM1Q03395 351 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 ELOCQ15369 112 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 ACKR1Q16570 336 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 SGCBQ16585 318 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 MOB3CQ70IA8 216 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 CHST4Q8NCG5 386 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 NKD1Q969G9 470 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 TCTN2Q96GX1 697 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 NXF5Q9H1B4 397 aaKnown RBP9.69□□□□□ -0.86
CCDC40-207ENST00000572253 TCEAL2Q9H3H9 227 aaPredicted RBP9.69□□□□□ -0.86
CCDC40-207ENST00000572253 SOHLH2Q9NX45 425 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 SLC39A1Q9NY26 324 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 A0A1B0GTI1 187 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 A0A1W2PPC1 479 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 CD74P04233 296 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 CRABP1P29762 137 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 GLO1Q04760 184 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 SPOCK1Q08629 439 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 SNTB1Q13884 538 aaKnown RBP9.69□□□□□ -0.86
CCDC40-207ENST00000572253 NKPD1Q17RQ9 610 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 VWA2Q5GFL6 755 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 TEX30Q5JUR7 227 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 UQCC3Q6UW78 93 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 ZNF704Q6ZNC4 412 aaPredicted RBP9.69□□□□□ -0.86
CCDC40-207ENST00000572253 LYG2Q86SG7 212 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 SFTPA2Q8IWL1 248 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 FRMD1Q8N878 549 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 NKAIN3Q8N8D7 197 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 ZNF248Q8NDW4 579 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 ASB5Q8WWX0 329 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 MARC2Q969Z3 335 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 FAM46BQ96A09 425 aa9.69□□□□□ -0.86
CCDC40-207ENST00000572253 DNAJA3Q96EY1 480 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms