RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 OR2AJ1Q8NGZ0 328 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 APH1BQ8WW43 257 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 IPCEF1Q8WWN9 437 aaPredicted RBP20.51■□□□□ 0.87
RAB40C-212ENST00000569575 ZNF416Q9BWM5 594 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 MRPL22Q9NWU5 206 aaKnown RBP20.51■□□□□ 0.87
RAB40C-212ENST00000569575 DNAJC27Q9NZQ0 273 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 ATPIF1Q9UII2 106 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 SLC25A15Q9Y619 301 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 A0A096LPE4 126 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 A0A1W2PPZ6 126 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 M0R129 80 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 PHYHO14832 338 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 EPXP11678 715 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 IGFBP2P18065 325 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 CCKARP32238 428 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 PLP2Q04941 152 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 RAB40BQ12829 278 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 MED21Q13503 144 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 ENDOGQ14249 297 aaKnown RBP20.5■□□□□ 0.87
RAB40C-212ENST00000569575 PPA1Q15181 289 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 HIKESHIQ53FT3 197 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 IL17RDQ8NFM7 739 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 ZNRF4Q8WWF5 429 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 CNN2Q99439 309 aaKnown RBP20.5■□□□□ 0.87
RAB40C-212ENST00000569575 SPOCK3Q9BQ16 436 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 MED18Q9BUE0 208 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 CRNNQ9UBG3 495 aaPredicted RBP20.5■□□□□ 0.87
RAB40C-212ENST00000569575 POLR1DQ9Y2S0 133 aa20.5■□□□□ 0.87
RAB40C-212ENST00000569575 FAM171A2A8MVW0 826 aa20.49■□□□□ 0.87
RAB40C-212ENST00000569575 ZNF593O00488 134 aaPredicted RBP20.49■□□□□ 0.87
RAB40C-212ENST00000569575 COX5BP10606 129 aa20.49■□□□□ 0.87
RAB40C-212ENST00000569575 ATP6V1E1P36543 226 aa20.49■□□□□ 0.87
RAB40C-212ENST00000569575 RAB1AP62820 205 aa20.49■□□□□ 0.87
RAB40C-212ENST00000569575 HIST1H3AP68431 136 aa20.49■□□□□ 0.87
RAB40C-212ENST00000569575 TAB1Q15750 504 aa20.49■□□□□ 0.87
RAB40C-212ENST00000569575 HIST2H3PS2Q5TEC6 136 aa20.49■□□□□ 0.87
RAB40C-212ENST00000569575 HIST2H3AQ71DI3 136 aa20.49■□□□□ 0.87
RAB40C-212ENST00000569575 LRRC18Q8N456 261 aa20.49■□□□□ 0.87
RAB40C-212ENST00000569575 ZNF511Q8NB15 262 aa20.49■□□□□ 0.87
RAB40C-212ENST00000569575 ZMYND19Q96E35 227 aaPredicted RBP20.49■□□□□ 0.87
RAB40C-212ENST00000569575 SH3GL3Q99963 347 aa20.49■□□□□ 0.87
RAB40C-212ENST00000569575 RNF121Q9H920 327 aa20.49■□□□□ 0.87
RAB40C-212ENST00000569575 WDR76Q9H967 626 aa20.49■□□□□ 0.87
RAB40C-212ENST00000569575 NPDC1Q9NQX5 325 aaPredicted RBP20.49■□□□□ 0.87
RAB40C-212ENST00000569575 RAB36O95755 333 aa20.48■□□□□ 0.87
RAB40C-212ENST00000569575 FADS2O95864 444 aaKnown RBP20.48■□□□□ 0.87
RAB40C-212ENST00000569575 IGKV3-15P01624 115 aa20.48■□□□□ 0.87
RAB40C-212ENST00000569575 MMP7P09237 267 aaPredicted RBP20.48■□□□□ 0.87
RAB40C-212ENST00000569575 SBK2P0C263 348 aa20.48■□□□□ 0.87
RAB40C-212ENST00000569575 CCDC159P0C7I6 412 aa20.48■□□□□ 0.87
RAB40C-212ENST00000569575 OR2T7P0C7T2 308 aa20.48■□□□□ 0.87
RAB40C-212ENST00000569575 CAPZA2P47755 286 aa20.48■□□□□ 0.87
RAB40C-212ENST00000569575 NUDT6P53370 316 aa20.48■□□□□ 0.87
RAB40C-212ENST00000569575 ACTC1P68032 377 aa20.48■□□□□ 0.87
RAB40C-212ENST00000569575 ACTA1P68133 377 aa20.48■□□□□ 0.87
RAB40C-212ENST00000569575 ECH1Q13011 328 aa20.48■□□□□ 0.87
RAB40C-212ENST00000569575 BCDIN3DQ7Z5W3 292 aaKnown RBP20.48■□□□□ 0.87
RAB40C-212ENST00000569575 ERI1Q8IV48 349 aaKnown RBP20.48■□□□□ 0.87
RAB40C-212ENST00000569575 OR2T27Q8NH04 317 aa20.48■□□□□ 0.87
RAB40C-212ENST00000569575 OTOSQ8NHW6 89 aa20.48■□□□□ 0.87
RAB40C-212ENST00000569575 FAM222BQ8WU58 562 aa20.48■□□□□ 0.87
RAB40C-212ENST00000569575 ASB17Q8WXJ9 295 aa20.48■□□□□ 0.87
RAB40C-212ENST00000569575 YTHDF1Q9BYJ9 559 aaKnown RBP20.48■□□□□ 0.87
RAB40C-212ENST00000569575 SCN3BQ9NY72 215 aa20.48■□□□□ 0.87
RAB40C-212ENST00000569575 ZNF224Q9NZL3 707 aa20.48■□□□□ 0.87
RAB40C-212ENST00000569575 CNOT2Q9NZN8 540 aaKnown RBP20.48■□□□□ 0.87
RAB40C-212ENST00000569575 EXOGQ9Y2C4 368 aaKnown RBP20.48■□□□□ 0.87
RAB40C-212ENST00000569575 CASKO14936 926 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 SEC14L2O76054 403 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 MPZL1O95297 269 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 DBTP11182 482 aaKnown RBP20.47■□□□□ 0.87
RAB40C-212ENST00000569575 PIPP12273 146 aaPredicted RBP20.47■□□□□ 0.87
RAB40C-212ENST00000569575 TSC22D1Q15714 1073 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 C6orf141Q5SZD1 244 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 SLC18B1Q6NT16 456 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 DMRTC2Q8IXT2 367 aaPredicted RBP20.47■□□□□ 0.87
RAB40C-212ENST00000569575 CNIH3Q8TBE1 160 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 FBXO17Q96EF6 278 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 RNFT2Q96EX2 444 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 MRPL48Q96GC5 212 aaKnown RBP20.47■□□□□ 0.87
RAB40C-212ENST00000569575 WFIKKN1Q96NZ8 548 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 HDHD2Q9H0R4 259 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 ADGRL4Q9HBW9 690 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 EMC7Q9NPA0 242 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 INPP5EQ9NRR6 644 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 ASH2LQ9UBL3 628 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 BLOC1S6Q9UL45 172 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 LHFPL6Q9Y693 200 aa20.47■□□□□ 0.87
RAB40C-212ENST00000569575 USP9XQ93008 2570 aaPredicted RBP20.46■□□□□ 0.87
RAB40C-212ENST00000569575 IQCMA0A1B0GVH7 501 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 EFCAB10A6NFE3 127 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 TVP23AA6NH52 213 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 SERPINA5P05154 406 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 SCG5P05408 212 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 CD79AP11912 226 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 ZNF32P17041 273 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 KIR2DL3P43628 341 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 ZNF91Q05481 1191 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 KCTD18Q6PI47 426 aaPredicted RBP20.46■□□□□ 0.87
RAB40C-212ENST00000569575 DEGS2Q6QHC5 323 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms