RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 CD8AP01732 235 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 CECR9P0C854 216 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 RAP2AP10114 183 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 B4GALT1P15291 398 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 NR4A1P22736 598 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 FPR3P25089 353 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 MAGEA2P43356 314 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 GPR4P46093 362 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 LIMS1P48059 325 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 IDH3GP51553 393 aaPredicted RBP7.96□□□□□ -1.14
CAPN3-219ENST00000569136 RPS6KA3P51812 740 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 DSCR9P59020 149 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 ERVK-25P63136 954 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 MS4A2Q01362 244 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 SPIBQ01892 262 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 PIGFQ07326 219 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 MELKQ14680 651 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 RAB35Q15286 201 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 SEC23BQ15437 767 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 RFX4Q33E94 735 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 FAM27BQ5VT28 67 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 C1orf94Q6P1W5 598 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 PGM2L1Q6PCE3 622 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 SLC25A47Q6Q0C1 308 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 SMARCD3Q6STE5 483 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 SLC16A14Q7RTX9 510 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 ZER1Q7Z7L7 766 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 MDP1Q86V88 176 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 SKA3Q8IX90 412 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 NOXO1Q8NFA2 376 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 OR13C2Q8NGS9 318 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 GNPDA2Q8TDQ7 276 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 NEUROG1Q92886 237 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 NMD3Q96D46 503 aaKnown RBP7.96□□□□□ -1.14
CAPN3-219ENST00000569136 GPX7Q96SL4 187 aaPredicted RBP7.96□□□□□ -1.14
CAPN3-219ENST00000569136 CDIP1Q9H305 208 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 MMADHCQ9H3L0 296 aaPredicted RBP7.96□□□□□ -1.14
CAPN3-219ENST00000569136 ZNF442Q9H7R0 627 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 YY1AP1Q9H869 796 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 RNF121Q9H920 327 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 NRIP3Q9NQ35 241 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 CA10Q9NS85 328 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 TIMM10BQ9Y5J6 103 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 V9GYQ6 96 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 AKAP9Q99996 3911 aa7.96□□□□□ -1.14
CAPN3-219ENST00000569136 IGHV2OR16-5A0A0B4J2B6 119 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 TCRBV5S2A0A599 114 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 PRSS37A4D1T9 235 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 FAM171A2A8MVW0 826 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 ATP6V1G2-DDX39BF2Z307 99 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 ACOT8O14734 319 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 ARPC3O15145 178 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 DNAJC8O75937 253 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-219ENST00000569136 TXNDC12O95881 172 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 ZNF35P13682 527 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 ZNF14P17017 642 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-219ENST00000569136 PTDSS1P48651 473 aaKnown RBP7.95□□□□□ -1.14
CAPN3-219ENST00000569136 EVX1P49640 407 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 SELENOVP59797 346 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 RPS23P62266 143 aaKnown RBP7.95□□□□□ -1.14
CAPN3-219ENST00000569136 TUBA1BP68363 451 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 TUBA4AP68366 448 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 GALK2Q01415 458 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 CD47Q08722 323 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 NPRL3Q12980 569 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 BNIP1Q12981 228 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 TSPAN31Q12999 210 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 TOP3AQ13472 1001 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-219ENST00000569136 SGCAQ16586 387 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 Q5PR19 223 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 OR2T5Q6IEZ7 315 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 RPL13AP3Q6NVV1 102 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 UNQ6126/PRO20091Q6UXV3 157 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 TUBA1AQ71U36 451 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 YTHDF3Q7Z739 585 aaKnown RBP7.95□□□□□ -1.14
CAPN3-219ENST00000569136 ADCK1Q86TW2 530 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 WDFY1Q8IWB7 410 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 C1orf174Q8IYL3 243 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 OR2T29Q8NH02 315 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 ZNF519Q8TB69 540 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 HDAC2Q92769 488 aaKnown RBP7.95□□□□□ -1.14
CAPN3-219ENST00000569136 PERPQ96FX8 193 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 RSRC1Q96IZ7 334 aaKnown RBP7.95□□□□□ -1.14
CAPN3-219ENST00000569136 ZNF75AQ96N20 296 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 TSPAN32Q96QS1 320 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 SH3GL3Q99963 347 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 CHID1Q9BWS9 393 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 GCM1Q9NP62 436 aa7.95□□□□□ -1.14
CAPN3-219ENST00000569136 IQCMA0A1B0GVH7 501 aa7.94□□□□□ -1.14
CAPN3-219ENST00000569136 C12orf71A8MTZ7 269 aa7.94□□□□□ -1.14
CAPN3-219ENST00000569136 H7C417 338 aa7.94□□□□□ -1.14
CAPN3-219ENST00000569136 KHDRBS3O75525 346 aaKnown RBP7.94□□□□□ -1.14
CAPN3-219ENST00000569136 CCNB2O95067 398 aa7.94□□□□□ -1.14
CAPN3-219ENST00000569136 CST2P09228 141 aa7.94□□□□□ -1.14
CAPN3-219ENST00000569136 OR4A8P0C604 315 aa7.94□□□□□ -1.14
CAPN3-219ENST00000569136 GSTM3P21266 225 aa7.94□□□□□ -1.14
CAPN3-219ENST00000569136 ATP6V1B2P21281 511 aa7.94□□□□□ -1.14
CAPN3-219ENST00000569136 PCSK6P29122 969 aa7.94□□□□□ -1.14
CAPN3-219ENST00000569136 CRABP1P29762 137 aa7.94□□□□□ -1.14
CAPN3-219ENST00000569136 SDHAP31040 664 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms