RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 LIPNQ5VXI9 398 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 CEACAM19Q7Z692 300 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 CCDC190Q86UF4 302 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 ZNF679Q8IYX0 411 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 GALNT16Q8N428 558 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 FAM83FQ8NEG4 500 aaPredicted RBP13□□□□□ -0.33
COMMD4-221ENST00000567935 THEM6Q8WUY1 208 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 TXNDC15Q96J42 360 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 SFXN2Q96NB2 322 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 AGAP4Q96P64 663 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 SLC30A2Q9BRI3 323 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 TIGARQ9NQ88 270 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 MRPL22Q9NWU5 206 aaKnown RBP13□□□□□ -0.33
COMMD4-221ENST00000567935 MED29Q9NX70 200 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 QPCTLQ9NXS2 382 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 ADAM30Q9UKF2 790 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 COA3Q9Y2R0 106 aaPredicted RBP13□□□□□ -0.33
COMMD4-221ENST00000567935 KLHDC2Q9Y2U9 406 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 GRIP1Q9Y3R0 1128 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 CMAHPQ9Y471 501 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 CSMD2Q7Z408 3487 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 A0A0G2JMM0 328 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 A0A1W2PPB8 328 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 A0A1W2PRS3 328 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 ISPDA4D126 451 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 OR5H15A6NDH6 313 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 KIR3DP1A8MWS1 328 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 J3QRK9 145 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 WDPCPO95876 746 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 HPNP05981 417 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 UCHL1P09936 223 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 OR8G3PP0DMU2 310 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 CCR9P51686 369 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 PPP3R1P63098 170 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 MXD1Q05195 221 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 MFAP5Q13361 173 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 SLC17A1Q14916 467 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 HIST3H3Q16695 136 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 HYAL4Q2M3T9 481 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 ZMAT1Q5H9K5 638 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 UNQ9370/PRO34162Q6UXP9 181 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 RPTNQ6XPR3 784 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 GPAT4Q86UL3 456 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 SYT14Q8NB59 555 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 MINDY2Q8NBR6 621 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 OR10H5Q8NGA6 315 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 OR52N5Q8NH56 324 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 NSMAFQ92636 917 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 POM121Q96HA1 1249 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 KCNS3Q9BQ31 491 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 MROQ9BYG7 248 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 COMMD4Q9H0A8 199 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 TPK1Q9H3S4 243 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 DEPPQ9NTK1 212 aa12.99□□□□□ -0.33
COMMD4-221ENST00000567935 ESPL1Q14674 2120 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 A0A0J9YW62 118 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 NPIPA2E9PIF3 369 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 NPIPA3F8WFD2 350 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 KLRC4-KLRK1H3BQV0 150 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 NME2P1O60361 137 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 CD46P15529 392 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 NME2P22392 152 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 ENPP1P22413 925 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 PTBP1P26599 531 aaKnown RBP eCLIP12.98□□□□□ -0.33
COMMD4-221ENST00000567935 CALRP27797 417 aaKnown RBP12.98□□□□□ -0.33
COMMD4-221ENST00000567935 LAP3P28838 519 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 ZNF133P52736 654 aaPredicted RBP12.98□□□□□ -0.33
COMMD4-221ENST00000567935 RIDAP52758 137 aaKnown RBP12.98□□□□□ -0.33
COMMD4-221ENST00000567935 CDC20Q12834 499 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 KCNMB1Q16558 191 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 ZNF181Q2M3W8 571 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 DEFB109BQ30KR1 87 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 HBMQ6B0K9 141 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 SLC25A25Q6KCM7 469 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 SLC25A47Q6Q0C1 308 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 RHOUQ7L0Q8 258 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 KRT77Q7Z794 578 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 YRDCQ86U90 279 aaKnown RBP12.98□□□□□ -0.33
COMMD4-221ENST00000567935 MDS2Q8NDY4 140 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 OR2G2Q8NGZ5 317 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 OR5AK2Q8NH90 309 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 OR2V1Q8NHB1 315 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 CPT1CQ8TCG5 803 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 RNF128Q8TEB7 428 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 DCLRE1CQ96SD1 692 aaKnown RBP12.98□□□□□ -0.33
COMMD4-221ENST00000567935 ABHD6Q9BV23 337 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 CCDC32Q9BV29 185 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 TTTY10Q9BZA0 68 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 ZNF703Q9H7S9 590 aaPredicted RBP12.98□□□□□ -0.33
COMMD4-221ENST00000567935 RCE1Q9Y256 329 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 UGT2A1Q9Y4X1 527 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 FREM3P0C091 2139 aa12.98□□□□□ -0.33
COMMD4-221ENST00000567935 FBN3Q75N90 2809 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 TTLL8A6PVC2 850 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 PRR32B1ATL7 298 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 PDCD5O14737 125 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 RGS5O15539 181 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 LRRTM2O43300 516 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 TRAPPC6AO75865 159 aa12.97□□□□□ -0.33
COMMD4-221ENST00000567935 OPN1LWP04000 364 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms