RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 LPAR4Q99677 370 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 FAM96BQ9Y3D0 163 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 ZFC3H1O60293 1989 aaKnown RBP11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 SUSD5O60279 629 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 SLC2A1P11166 492 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 CSNK1A1P48729 337 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 DHPSP49366 369 aaPredicted RBP11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 CDK5Q00535 292 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 DOC2BQ14184 412 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 CNN3Q15417 329 aaKnown RBP11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 OR2T2Q6IF00 324 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 CLEC1AQ8NC01 280 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 ARRDC3Q96B67 414 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 MS4A6EQ96DS6 147 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 SCMH1Q96GD3 660 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 EPHX3Q9H6B9 360 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 CBY1Q9Y3M2 126 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 XRCC3O43542 346 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 IGHG1P01857 330 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 HOXB9P17482 250 aaPredicted RBP11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 RAB1AP62820 205 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 LDLRAD1Q5T700 205 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 LGI3Q8N145 548 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 ZDHHC5Q9C0B5 715 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 NXT1Q9UKK6 140 aaKnown RBP11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 PLEKHM1Q9Y4G2 1056 aa11.34□□□□□ -0.59
CSPG4P13-202ENST00000567704 TNRC6CQ9HCJ0 1690 aaKnown RBP11.33□□□□□ -0.59
CSPG4P13-202ENST00000567704 DDX60Q8IY21 1712 aaKnown RBP11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 HNRNPA1P09651 372 aaKnown RBP eCLIP11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 CYBAP13498 195 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 DPP4P27487 766 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 NTSR1P30989 418 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 HRH1P35367 487 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 HMGA2P52926 109 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 MARCH3Q86UD3 253 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 CBLN2Q8IUK8 224 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 C10orf111Q8N326 155 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 GPR32P1Q8NGA4 272 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 OR10D4PQ8NGN7 298 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 OR1J1Q8NGS3 322 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 PIGCQ92535 297 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 SLC22A13Q9Y226 551 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 TRBV5-4A0A0C4DH59 114 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 LRP3O75074 770 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 DDAH2O95865 285 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 MT-CO2P00403 227 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 HPXP02790 462 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 CASRP41180 1078 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 RAB31Q13636 194 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 MORN1Q5T089 497 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 ATPAF1Q5TC12 328 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 CORO6Q6QEF8 472 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 TINAGL1Q9GZM7 467 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 AK3Q9UIJ7 227 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 TP53TG5Q9Y2B4 290 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 PCDHGA5Q9Y5G8 931 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 LOC107986453A0A1B0GWG9 222 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 TCRBV21S2A2A0A5A6 115 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 OTOL1A6NHN0 477 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 K7ESM1 405 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 THBS1P07996 1170 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 CTSAP10619 480 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 CSF2RAP15509 400 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 RAB4AP20338 218 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 TAF9Q16594 264 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 MED25Q71SY5 747 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 SKA3Q8IX90 412 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 ZNF439Q8NDP4 499 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 WBP2Q969T9 261 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 SPACA5Q96QH8 159 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 COA3Q9Y2R0 106 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 H7BYZ3 331 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 BSGP35613 385 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 ATP1B3P54709 279 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 MCCD1P59942 119 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 ARHGAP11BQ3KRB8 267 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 TRILQ7L0X0 811 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 SPICQ8N5J4 248 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 OR5L1Q8NGL2 311 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 SUCNR1Q9BXA5 334 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 DUSP22Q9NRW4 184 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 IL20Q9NYY1 176 aa11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 ING1Q9UK53 422 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P13-202ENST00000567704 NAT2P11245 290 aa11.32□□□□□ -0.6
CSPG4P13-202ENST00000567704 MSX1P28360 303 aa11.32□□□□□ -0.6
CSPG4P13-202ENST00000567704 PJVKQ0ZLH3 352 aa11.32□□□□□ -0.6
CSPG4P13-202ENST00000567704 CLEC12BQ2HXU8 276 aa11.32□□□□□ -0.6
CSPG4P13-202ENST00000567704 MANEAQ5SRI9 462 aa11.32□□□□□ -0.6
CSPG4P13-202ENST00000567704 PLCXD3Q63HM9 321 aa11.32□□□□□ -0.6
CSPG4P13-202ENST00000567704 MOB3CQ70IA8 216 aa11.32□□□□□ -0.6
CSPG4P13-202ENST00000567704 ZC3HAV1LQ96H79 300 aaKnown RBP11.32□□□□□ -0.6
CSPG4P13-202ENST00000567704 WWTR1Q9GZV5 400 aa11.32□□□□□ -0.6
CSPG4P13-202ENST00000567704 MMP24Q9Y5R2 645 aa11.32□□□□□ -0.6
CSPG4P13-202ENST00000567704 TRAV36DV7A0A075B6V5 113 aa11.32□□□□□ -0.6
CSPG4P13-202ENST00000567704 LRP5O75197 1615 aa11.32□□□□□ -0.6
CSPG4P13-202ENST00000567704 MBP02144 154 aa11.32□□□□□ -0.6
CSPG4P13-202ENST00000567704 GABRA1P14867 456 aa11.32□□□□□ -0.6
CSPG4P13-202ENST00000567704 RAB38P57729 211 aa11.32□□□□□ -0.6
CSPG4P13-202ENST00000567704 SEZ6L2Q6UXD5 910 aa11.32□□□□□ -0.6
CSPG4P13-202ENST00000567704 DND1Q8IYX4 353 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms