RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 RNF128Q8TEB7 428 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 CCDC107Q8WV48 283 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 ASB5Q8WWX0 329 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 ASB17Q8WXJ9 295 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 PELOQ9BRX2 385 aaKnown RBP12.82□□□□□ -0.36
CDH1-209ENST00000566510 OR11A1Q9GZK7 315 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 PDE7BQ9NP56 450 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 MRPL22Q9NWU5 206 aaKnown RBP12.82□□□□□ -0.36
CDH1-209ENST00000566510 DHCR7Q9UBM7 475 aaKnown RBP12.82□□□□□ -0.36
CDH1-209ENST00000566510 EMC9Q9Y3B6 208 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 ASXL3Q9C0F0 2248 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 TPPPO94811 219 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 ZNF28P17035 718 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 INSM1Q01101 510 aaPredicted RBP12.82□□□□□ -0.36
CDH1-209ENST00000566510 KIAA0895LQ68EN5 471 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 BEST3Q8N1M1 668 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 OR13C3Q8NGS6 347 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 GPX8Q8TED1 209 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 PDCD10Q9BUL8 212 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 ABHD6Q9BV23 337 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 PTDSS2Q9BVG9 487 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 EPHA6Q9UF33 1036 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 LRP12Q9Y561 859 aa12.82□□□□□ -0.36
CDH1-209ENST00000566510 MRPS18BQ9Y676 258 aaKnown RBP12.82□□□□□ -0.36
CDH1-209ENST00000566510 COL4A2P08572 1712 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 FITM1A5D6W6 292 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 KRBOX1C9JBD0 128 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 SDC3O75056 442 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 ALOX12BO75342 701 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 ACHEP22303 614 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 RIPPLY1Q0D2K3 151 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 ZMYND11Q15326 602 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 ARSKQ6UWY0 536 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 CD163Q86VB7 1156 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 NAXDQ8IW45 347 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 CDH26Q8IXH8 852 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 STEAP2Q8NFT2 490 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 OR1J2Q8NGS2 313 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 FAM174AQ8TBP5 190 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 LMX1AQ8TE12 382 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 THRSPQ92748 146 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 COA3Q9Y2R0 106 aaPredicted RBP12.81□□□□□ -0.36
CDH1-209ENST00000566510 SLC22A23A1A5C7 686 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 FRG2CA6NGY1 282 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 ZNF736B4DX44 427 aaPredicted RBP12.81□□□□□ -0.36
CDH1-209ENST00000566510 SOX1O00570 391 aaPredicted RBP12.81□□□□□ -0.36
CDH1-209ENST00000566510 PLCXD2Q0VAA5 305 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 ATXN7L3Q14CW9 347 aaPredicted RBP12.81□□□□□ -0.36
CDH1-209ENST00000566510 TAF13Q15543 124 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 BEX5Q5H9J7 111 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 FAM74A1Q5RGS3 127 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 ACBD4Q8NC06 268 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 OR4S1Q8NGB4 309 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 OR1S1Q8NH92 325 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 SEC22AQ96IW7 307 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 C12orf10Q9HB07 376 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 CLEC1BQ9P126 229 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 GPR160Q9UJ42 338 aa12.81□□□□□ -0.36
CDH1-209ENST00000566510 NOP16Q9Y3C1 178 aaKnown RBP12.81□□□□□ -0.36
CDH1-209ENST00000566510 TMEM235A6NFC5 223 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 PMS2P2O95744 297 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 APOC3P02656 99 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 ITGB2P05107 769 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 PGCP20142 388 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 BAMBIQ13145 260 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 MOGAT2Q3SYC2 334 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 TEX30Q5JUR7 227 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 LINC00346Q8IVM7 164 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 BPIFB2Q8N4F0 458 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 DPYSL5Q9BPU6 564 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 NUDT9Q9BW91 350 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 S1PR5Q9H228 398 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 TMEM185BQ9H7F4 350 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 LANCL2Q9NS86 450 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 MSRAQ9UJ68 235 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 TMED7-TICAM2A0A0A6YYA0 188 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 HSPB2A8KAH6 182 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 A8MXK9 166 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 FAM25EA8MYX2 175 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 EIF1AYO14602 144 aaKnown RBP12.8□□□□□ -0.36
CDH1-209ENST00000566510 CCSO14618 274 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 SIGLEC5O15389 551 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 GLO1Q04760 184 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 SIGLEC14Q08ET2 396 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 NSDHLQ15738 373 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 HSPB2Q16082 182 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 SGCBQ16585 318 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 VWA2Q5GFL6 755 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 LIN54Q6MZP7 749 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 BVESQ8NE79 360 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 OR5M9Q8NGP3 310 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 ADIPOR1Q96A54 375 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 SLC41A2Q96JW4 573 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 SHARPINQ9H0F6 387 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 CUTCQ9NTM9 273 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 MMP17Q9ULZ9 603 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 TMED7Q9Y3B3 224 aa12.8□□□□□ -0.36
CDH1-209ENST00000566510 RFPL4AA6NLU0 287 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 RFPL4AL1F8VTS6 287 aa12.79□□□□□ -0.36
CDH1-209ENST00000566510 H0YIG0 161 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms