RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 SHISA5Q8N114 240 aa19.46■□□□□ 0.71
SPSB3-208ENST00000566339 C19orf47Q8N9M1 422 aaKnown RBP19.46■□□□□ 0.71
SPSB3-208ENST00000566339 PHOSPHO1Q8TCT1 267 aa19.46■□□□□ 0.71
SPSB3-208ENST00000566339 LRRC46Q96FV0 321 aa19.46■□□□□ 0.71
SPSB3-208ENST00000566339 KXD1Q9BQD3 176 aa19.46■□□□□ 0.71
SPSB3-208ENST00000566339 NDRG3Q9UGV2 375 aa19.46■□□□□ 0.71
SPSB3-208ENST00000566339 RNF222A6NCQ9 220 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 CLPSP04118 112 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 ISG15P05161 165 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 HOXB2P14652 356 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 ACHEP22303 614 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 GDI1P31150 447 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 UBE2MP61081 183 aaKnown RBP19.45■□□□□ 0.7
SPSB3-208ENST00000566339 DHRS2Q13268 280 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 MED25Q71SY5 747 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 MAMDC2Q7Z304 686 aaPredicted RBP19.45■□□□□ 0.7
SPSB3-208ENST00000566339 ZSCAN1Q8NBB4 408 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 ASB5Q8WWX0 329 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 MARC2Q969Z3 335 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 ZBTB8AQ96BR9 441 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 SLC46A1Q96NT5 459 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 NPAS1Q99742 590 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 NKX6-2Q9C056 277 aaPredicted RBP19.45■□□□□ 0.7
SPSB3-208ENST00000566339 SYT4Q9H2B2 425 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 KCNG2Q9UJ96 466 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 ZNF175Q9Y473 711 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 FANCMQ8IYD8 2048 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 NCOR1O75376 2440 aa19.45■□□□□ 0.7
SPSB3-208ENST00000566339 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.44■□□□□ 0.7
SPSB3-208ENST00000566339 GSK3AP49840 483 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 MC2RQ01718 297 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 CD226Q15762 336 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 SGCBQ16585 318 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 LYG2Q86SG7 212 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 BPIFB2Q8N4F0 458 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 ZNF519Q8TB69 540 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 CDCA3Q99618 268 aaPredicted RBP19.44■□□□□ 0.7
SPSB3-208ENST00000566339 CDC6Q99741 560 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 A0A0A6YYC8 382 aaPredicted RBP19.44■□□□□ 0.7
SPSB3-208ENST00000566339 PRSS37A4D1T9 235 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 I3L1I5 382 aaPredicted RBP19.44■□□□□ 0.7
SPSB3-208ENST00000566339 SIGLEC6O43699 453 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 MTRF1O75570 445 aaKnown RBP19.44■□□□□ 0.7
SPSB3-208ENST00000566339 ZBTB25P24278 435 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 RPL27P61353 136 aaKnown RBP19.44■□□□□ 0.7
SPSB3-208ENST00000566339 NAAAQ02083 359 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 PMPCAQ10713 525 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 SNTB1Q13884 538 aaKnown RBP19.44■□□□□ 0.7
SPSB3-208ENST00000566339 ARMC10Q8N2F6 343 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 OR8S1Q8NH09 359 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 OR8K3Q8NH51 312 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 STOML3Q8TAV4 291 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 MITD1Q8WV92 249 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 TAAR8Q969N4 342 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 KTI12Q96EK9 354 aaPredicted RBP19.44■□□□□ 0.7
SPSB3-208ENST00000566339 ZNF285Q96NJ3 590 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 VRK1Q99986 396 aaPredicted RBP19.44■□□□□ 0.7
SPSB3-208ENST00000566339 GAREM1Q9H706 876 aa19.44■□□□□ 0.7
SPSB3-208ENST00000566339 UBE2ZQ9H832 354 aaPredicted RBP19.44■□□□□ 0.7
SPSB3-208ENST00000566339 EML5Q05BV3 1969 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 A0A1W2PQD3 144 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 METTL21EPA6NDL7 271 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 FRG2CA6NGY1 282 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 C4orf47A7E2U8 309 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 UTS2O95399 124 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 RABIFP47224 123 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 DCAF7P61962 342 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 ELOCQ15369 112 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 C5orf46Q6UWT4 87 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 ZNF704Q6ZNC4 412 aaPredicted RBP19.43■□□□□ 0.7
SPSB3-208ENST00000566339 ZNF584Q8IVC4 421 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 FRMD1Q8N878 549 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 ZNF563Q8TA94 476 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 DVL3Q92997 716 aaPredicted RBP19.43■□□□□ 0.7
SPSB3-208ENST00000566339 C8orf44Q96CB5 159 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 SLC6A17Q9H1V8 727 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 TMEM185BQ9H7F4 350 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 FAM60AQ9NP50 221 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 STARD5Q9NSY2 213 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 GMEB2Q9UKD1 530 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 HHLA2Q9UM44 414 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 ATG2BQ96BY7 2078 aa19.43■□□□□ 0.7
SPSB3-208ENST00000566339 H0Y8X5 98 aa19.42■□□□□ 0.7
SPSB3-208ENST00000566339 OR6A2O95222 327 aa19.42■□□□□ 0.7
SPSB3-208ENST00000566339 ST6GAL1P15907 406 aa19.42■□□□□ 0.7
SPSB3-208ENST00000566339 COL9A1P20849 921 aa19.42■□□□□ 0.7
SPSB3-208ENST00000566339 ARRB1P49407 418 aaPredicted RBP19.42■□□□□ 0.7
SPSB3-208ENST00000566339 PPIAP62937 165 aaKnown RBP19.42■□□□□ 0.7
SPSB3-208ENST00000566339 ASPHD2Q6ICH7 369 aa19.42■□□□□ 0.7
SPSB3-208ENST00000566339 DEGS2Q6QHC5 323 aa19.42■□□□□ 0.7
SPSB3-208ENST00000566339 OR2W3Q7Z3T1 314 aa19.42■□□□□ 0.7
SPSB3-208ENST00000566339 LINC00518Q8N0U6 118 aa19.42■□□□□ 0.7
SPSB3-208ENST00000566339 GALNT16Q8N428 558 aa19.42■□□□□ 0.7
SPSB3-208ENST00000566339 OR13C8Q8NGS7 320 aa19.42■□□□□ 0.7
SPSB3-208ENST00000566339 STK35Q8TDR2 534 aa19.42■□□□□ 0.7
SPSB3-208ENST00000566339 SLC37A2Q8TED4 501 aa19.42■□□□□ 0.7
SPSB3-208ENST00000566339 METTL21AQ8WXB1 218 aa19.42■□□□□ 0.7
SPSB3-208ENST00000566339 AQP3Q92482 292 aa19.42■□□□□ 0.7
SPSB3-208ENST00000566339 ULBP3Q9BZM4 244 aa19.42■□□□□ 0.7
SPSB3-208ENST00000566339 IGFLR1Q9H665 355 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms