RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 P3H4Q92791 437 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 GLYATL1Q969I3 302 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 RAB7BQ96AH8 199 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 C8orf44Q96CB5 159 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 MED8Q96G25 268 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 CDKN2AIPNLQ96HQ2 116 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 DNAJC1Q96KC8 554 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 CAPZA3Q96KX2 299 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 C9orf72Q96LT7 481 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 CCDC114Q96M63 670 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 C12orf66Q96MD2 445 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 TTC25Q96NG3 672 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 PRAP1Q96NZ9 151 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 OLFM3Q96PB7 478 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 TSGA13Q96PP4 275 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 OR2M4Q96R27 311 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 BAG1Q99933 345 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 TBL1YQ9BQ87 522 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 TRIM62Q9BVG3 475 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 ACAT2Q9BWD1 397 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 GSDMCQ9BYG8 508 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 OSBPL8Q9BZF1 889 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 ULBP3Q9BZM4 244 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 POLR1EQ9GZS1 481 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 SLC26A1Q9H2B4 701 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 KAT8Q9H7Z6 458 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 GPN2Q9H9Y4 310 aaPredicted RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 MRPL47Q9HD33 250 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 SLC40A1Q9NP59 571 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 LZTFL1Q9NQ48 299 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 IMP3Q9NV31 184 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 ZNHIT6Q9NWK9 470 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 DHCR7Q9UBM7 475 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 RNF14Q9UBS8 474 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 FAM153AQ9UHL3 310 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 APPL1Q9UKG1 709 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 TP53TG5Q9Y2B4 290 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 MRPS2Q9Y399 296 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 PPIL1Q9Y3C6 166 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 BZW2Q9Y6E2 419 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 CLCA3PQ9Y6N3 262 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 TLN1Q9Y490 2541 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 TRRAPQ9Y4A5 3859 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 RTTNQ86VV8 2226 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 HIVEP3Q5T1R4 2406 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 TEP1Q99973 2627 aaKnown RBP0.96□□□□□ -2.26
SMG1-212ENST00000566328 APCP25054 2843 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 KIAA1549Q9HCM3 1950 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 NF1P21359 2839 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 SPG11Q96JI7 2443 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 ABCA2Q9BZC7 2435 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 MED13LQ71F56 2210 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 IGKV1-8A0A0C4DH67 115 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 A0A0G2JN53 185 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 A0A0J9YVX5 310 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 GLYATL1P3A0A0U1RQE8 302 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 ZNF860A6NHJ4 632 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 H0YGG7 62 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 H3BMH7 237 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 SGK494L7N484 410 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 KMOO15229 486 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 NPIPB7O75200 414 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 NIPSNAP2O75323 286 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 SCRG1O75711 98 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 VAPBO95292 243 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 GUCA1CO95843 209 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 FGGP02679 453 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 SERPIND1P05546 499 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 PTMAP06454 111 aaKnown RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 APRTP07741 180 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 THRAP10827 490 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 UGT2B7P16662 529 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 NELFEP18615 380 aaKnown RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 SDC1P18827 310 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 MSNP26038 577 aaKnown RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 IVDP26440 423 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 PTBP1P26599 531 aaKnown RBP eCLIP0.95□□□□□ -2.26
SMG1-212ENST00000566328 OTX2P32243 289 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 FOXN2P32314 431 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 CTNNA1P35221 906 aaKnown RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 SERPINB6P35237 376 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 SPAM1P38567 509 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 RFC3P40938 356 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 SLC1A1P43005 524 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 BDKRB1P46663 353 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 ZNF140P52738 457 aaPredicted RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 AIF1P55008 147 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 CDKN2DP55273 166 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 RWDD2BP57060 319 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 VSX2P58304 361 aaPredicted RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 TPM4P67936 248 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 BTG2P78543 158 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 CCZ1BP86790 482 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 CCZ1P86791 482 aaPredicted RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 ILKQ13418 452 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 XRCC4Q13426 336 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 KLF5Q13887 457 aaPredicted RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 TFDP2Q14188 446 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 GRB7Q14451 532 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 KCNJ11Q14654 390 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms