RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 DLL4Q9NR61 685 aa11.96□□□□□ -0.49
HERPUD1-210ENST00000565966 BAIAP2Q9UQB8 552 aa11.96□□□□□ -0.49
HERPUD1-210ENST00000565966 COA3Q9Y2R0 106 aaPredicted RBP11.96□□□□□ -0.49
HERPUD1-210ENST00000565966 SPEF1Q9Y4P9 236 aa11.96□□□□□ -0.49
HERPUD1-210ENST00000565966 IGLV1-36A0A0B4J1U3 117 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 OR6C68A6NDL8 312 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 B9A039 149 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 IGHV4-39P01824 125 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 OR4A8P0C604 315 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 OSMP13725 252 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 ZNF32P17041 273 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 NR4A1P22736 598 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 CRABP1P29762 137 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 THBS4P35443 961 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 PLP2Q04941 152 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 DBPQ10586 325 aaPredicted RBP11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 ADIPOQQ15848 244 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 KRT80Q6KB66 452 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 FAHD1Q6P587 224 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 DNM1P34Q6PK57 102 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 UGT2A3Q6UWM9 527 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 HIPK1Q86Z02 1210 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 OR6V1Q8N148 313 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 ATG16L2Q8NAA4 619 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 OR2T33Q8NG76 320 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 TEX47Q8TBZ9 253 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 C18orf12Q96KH6 178 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 ZNF416Q9BWM5 594 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 C1orf198Q9H425 327 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 FN3KQ9H479 309 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 BARX1Q9HBU1 254 aaPredicted RBP11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 EMC7Q9NPA0 242 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 CCNB1IP1Q9NPC3 277 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 RPRD1BQ9NQG5 326 aaKnown RBP11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 GDF2Q9UK05 429 aaPredicted RBP11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 B9D1Q9UPM9 204 aa11.95□□□□□ -0.5
HERPUD1-210ENST00000565966 YLPM1P49750 1951 aaKnown RBP11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 IQCMA0A1B0GVH7 501 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 H3BN98 237 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 H3BNX3 289 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 H7C417 338 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 NDUFS7O75251 213 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 MPZL1O95297 269 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 ZNF23P17027 643 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 POU1F1P28069 291 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 GLRXP35754 106 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 DAPP51397 102 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 SNRPD2P62316 118 aaKnown RBP11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 GALK2Q01415 458 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 GABPB1Q06547 395 aaPredicted RBP11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 SNTB2Q13425 540 aaKnown RBP11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 EFNB3Q15768 340 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 CLEC12BQ2HXU8 276 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 PABPC1L2AQ5JQF8 200 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 ZFP1Q6P2D0 407 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 ZBTB46Q86UZ6 589 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 GLB1L2Q8IW92 636 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 IQCF1Q8N6M8 205 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 CYB561A3Q8NBI2 242 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 SLC37A3Q8NCC5 494 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 SLC30A7Q8NEW0 376 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 OR1J2Q8NGS2 313 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 DNAJC9Q8WXX5 260 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 CENPNQ96H22 339 aaPredicted RBP11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 RACGAP1Q9H0H5 632 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 WNT5BQ9H1J7 359 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 SEMA6AQ9H2E6 1030 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 KIF17Q9P2E2 1029 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 KLHL21Q9UJP4 597 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 FBXO9Q9UK97 447 aaPredicted RBP11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 FKBP7Q9Y680 259 aa11.94□□□□□ -0.5
HERPUD1-210ENST00000565966 CR1P17927 2039 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 C12orf71A8MTZ7 269 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 G3V2T6 193 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 GPANK1O95872 356 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 GAAP10253 952 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 GRK5P34947 590 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 CENPAP49450 140 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 PCBD1P61457 104 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 LSM6P62312 80 aaKnown RBP11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 PSG4Q00888 419 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 HSF2Q03933 536 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 CRMP1Q14194 572 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 KCNMB1Q16558 191 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 TBC1D28Q2M2D7 210 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 OTPQ5XKR4 325 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 ACSM5Q6NUN0 579 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 SYT9Q86SS6 491 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 ZDHHC13Q8IUH4 622 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 SVOPLQ8N434 492 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 AKR7LQ8NHP1 331 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 C11orf40Q8WZ69 217 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 PKP2Q99959 881 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 WACQ9BTA9 647 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 OR2H1Q9GZK4 316 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 GABARAPL1Q9H0R8 117 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 PLK3Q9H4B4 646 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 CDH20Q9HBT6 801 aa11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 PAPOLBQ9NRJ5 636 aaKnown RBP11.93□□□□□ -0.5
HERPUD1-210ENST00000565966 CMC2Q9NRP2 79 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms