RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 VSX1Q9NZR4 365 aaPredicted RBP26.4■■□□□ 1.82
CMTM4-204ENST00000563952 LOC100509620A0A075B734 347 aa26.39■■□□□ 1.82
CMTM4-204ENST00000563952 LOC390937A0A1W2PQ73 354 aa26.39■■□□□ 1.82
CMTM4-204ENST00000563952 NDUFS8O00217 210 aa26.39■■□□□ 1.82
CMTM4-204ENST00000563952 KHDRBS3O75525 346 aaKnown RBP26.39■■□□□ 1.82
CMTM4-204ENST00000563952 TXNDC12O95881 172 aa26.39■■□□□ 1.82
CMTM4-204ENST00000563952 CDKN2AP42771 156 aaKnown RBP26.39■■□□□ 1.82
CMTM4-204ENST00000563952 MAGEA2P43356 314 aa26.39■■□□□ 1.82
CMTM4-204ENST00000563952 GSSP48637 474 aa26.39■■□□□ 1.82
CMTM4-204ENST00000563952 LOXL1Q08397 574 aaPredicted RBP26.39■■□□□ 1.82
CMTM4-204ENST00000563952 ALKBH6Q3KRA9 238 aa26.39■■□□□ 1.82
CMTM4-204ENST00000563952 C1orf94Q6P1W5 598 aa26.39■■□□□ 1.82
CMTM4-204ENST00000563952 PGBD2Q6P3X8 592 aa26.39■■□□□ 1.82
CMTM4-204ENST00000563952 C11orf40Q8WZ69 217 aa26.39■■□□□ 1.82
CMTM4-204ENST00000563952 SAMD8Q96LT4 415 aa26.39■■□□□ 1.82
CMTM4-204ENST00000563952 LRGUKQ96M69 825 aa26.39■■□□□ 1.82
CMTM4-204ENST00000563952 IFT27Q9BW83 186 aa26.39■■□□□ 1.82
CMTM4-204ENST00000563952 MS4A5Q9H3V2 200 aa26.39■■□□□ 1.82
CMTM4-204ENST00000563952 EIF3KQ9UBQ5 218 aaKnown RBP26.39■■□□□ 1.82
CMTM4-204ENST00000563952 COA3Q9Y2R0 106 aaPredicted RBP26.39■■□□□ 1.82
CMTM4-204ENST00000563952 STAMBPO95630 424 aa26.38■■□□□ 1.81
CMTM4-204ENST00000563952 CLPTM1O96005 669 aa26.38■■□□□ 1.81
CMTM4-204ENST00000563952 APEHP13798 732 aaKnown RBP26.38■■□□□ 1.81
CMTM4-204ENST00000563952 USF1P22415 310 aaPredicted RBP26.38■■□□□ 1.81
CMTM4-204ENST00000563952 SELENOVP59797 346 aa26.38■■□□□ 1.81
CMTM4-204ENST00000563952 GGTLC2Q14390 218 aa26.38■■□□□ 1.81
CMTM4-204ENST00000563952 FAM98BQ52LJ0 330 aaKnown RBP26.38■■□□□ 1.81
CMTM4-204ENST00000563952 OTPQ5XKR4 325 aa26.38■■□□□ 1.81
CMTM4-204ENST00000563952 OR9Q2Q8NGE9 314 aa26.38■■□□□ 1.81
CMTM4-204ENST00000563952 OR1J1Q8NGS3 322 aa26.38■■□□□ 1.81
CMTM4-204ENST00000563952 SYNPRQ8TBG9 265 aa26.38■■□□□ 1.81
CMTM4-204ENST00000563952 ASB9Q96DX5 294 aa26.38■■□□□ 1.81
CMTM4-204ENST00000563952 NUAK2Q9H093 628 aa26.38■■□□□ 1.81
CMTM4-204ENST00000563952 FN1P02751 2386 aaKnown RBP26.38■■□□□ 1.81
CMTM4-204ENST00000563952 HIVEP2P31629 2446 aa26.37■■□□□ 1.81
CMTM4-204ENST00000563952 VWC2LB2RUY7 222 aa26.37■■□□□ 1.81
CMTM4-204ENST00000563952 CD5LO43866 347 aa26.37■■□□□ 1.81
CMTM4-204ENST00000563952 UBOX5O94941 541 aa26.37■■□□□ 1.81
CMTM4-204ENST00000563952 WNT5AP41221 380 aa26.37■■□□□ 1.81
CMTM4-204ENST00000563952 NR4A2P43354 598 aa26.37■■□□□ 1.81
CMTM4-204ENST00000563952 HMGA2P52926 109 aa26.37■■□□□ 1.81
CMTM4-204ENST00000563952 KLF3P57682 345 aaPredicted RBP26.37■■□□□ 1.81
CMTM4-204ENST00000563952 PPP1R8Q12972 351 aaKnown RBP26.37■■□□□ 1.81
CMTM4-204ENST00000563952 TSPAN31Q12999 210 aa26.37■■□□□ 1.81
CMTM4-204ENST00000563952 NKPD1Q17RQ9 610 aa26.37■■□□□ 1.81
CMTM4-204ENST00000563952 TMEM249Q2WGJ8 235 aa26.37■■□□□ 1.81
CMTM4-204ENST00000563952 SYT9Q86SS6 491 aa26.37■■□□□ 1.81
CMTM4-204ENST00000563952 JAZF1Q86VZ6 243 aa26.37■■□□□ 1.81
CMTM4-204ENST00000563952 GLB1L2Q8IW92 636 aa26.37■■□□□ 1.81
CMTM4-204ENST00000563952 TAAR3PQ9P1P4 343 aa26.37■■□□□ 1.81
CMTM4-204ENST00000563952 CHD3Q12873 2000 aaKnown RBP26.37■■□□□ 1.81
CMTM4-204ENST00000563952 MPZL1O95297 269 aa26.36■■□□□ 1.81
CMTM4-204ENST00000563952 NAT2P11245 290 aa26.36■■□□□ 1.81
CMTM4-204ENST00000563952 CENPAP49450 140 aa26.36■■□□□ 1.81
CMTM4-204ENST00000563952 ZNF620Q6ZNG0 422 aa26.36■■□□□ 1.81
CMTM4-204ENST00000563952 ZNF101Q8IZC7 436 aa26.36■■□□□ 1.81
CMTM4-204ENST00000563952 OR4C15Q8NGM1 316 aa26.36■■□□□ 1.81
CMTM4-204ENST00000563952 UBASH3BQ8TF42 649 aa26.36■■□□□ 1.81
CMTM4-204ENST00000563952 TSSK2Q96PF2 358 aa26.36■■□□□ 1.81
CMTM4-204ENST00000563952 YAE1D1Q9NRH1 226 aa26.36■■□□□ 1.81
CMTM4-204ENST00000563952 RTTNQ86VV8 2226 aa26.36■■□□□ 1.81
CMTM4-204ENST00000563952 CCNB2O95067 398 aa26.35■■□□□ 1.81
CMTM4-204ENST00000563952 ZNF250P15622 560 aa26.35■■□□□ 1.81
CMTM4-204ENST00000563952 NOS3P29474 1203 aa26.35■■□□□ 1.81
CMTM4-204ENST00000563952 SCRN3Q0VDG4 424 aa26.35■■□□□ 1.81
CMTM4-204ENST00000563952 SPATA46Q5T0L3 261 aa26.35■■□□□ 1.81
CMTM4-204ENST00000563952 LEG1Q6P5S2 330 aa26.35■■□□□ 1.81
CMTM4-204ENST00000563952 OR4K13Q8NH42 304 aa26.35■■□□□ 1.81
CMTM4-204ENST00000563952 NMNAT3Q96T66 252 aa26.35■■□□□ 1.81
CMTM4-204ENST00000563952 BTBD10Q9BSF8 475 aa26.35■■□□□ 1.81
CMTM4-204ENST00000563952 TRIM15Q9C019 465 aa26.35■■□□□ 1.81
CMTM4-204ENST00000563952 ABCA1O95477 2261 aa26.34■■□□□ 1.81
CMTM4-204ENST00000563952 LYNX1G3V0Z9 82 aa26.34■■□□□ 1.81
CMTM4-204ENST00000563952 ARPC3O15145 178 aa26.34■■□□□ 1.81
CMTM4-204ENST00000563952 DOK2O60496 412 aa26.34■■□□□ 1.81
CMTM4-204ENST00000563952 RENP00797 406 aa26.34■■□□□ 1.81
CMTM4-204ENST00000563952 LYNX1P0DP58 116 aa26.34■■□□□ 1.81
CMTM4-204ENST00000563952 HIST1H1CP16403 213 aaKnown RBP26.34■■□□□ 1.81
CMTM4-204ENST00000563952 DNM1P34Q6PK57 102 aa26.34■■□□□ 1.81
CMTM4-204ENST00000563952 LINC00471Q8N535 108 aa26.34■■□□□ 1.81
CMTM4-204ENST00000563952 WACQ9BTA9 647 aa26.34■■□□□ 1.81
CMTM4-204ENST00000563952 BPESC1Q9GZL8 116 aa26.34■■□□□ 1.81
CMTM4-204ENST00000563952 EGLN3Q9H6Z9 239 aa26.34■■□□□ 1.81
CMTM4-204ENST00000563952 VNN3Q9NY84 501 aa26.34■■□□□ 1.81
CMTM4-204ENST00000563952 GPR160Q9UJ42 338 aa26.34■■□□□ 1.81
CMTM4-204ENST00000563952 U3KQV3 271 aa26.34■■□□□ 1.81
CMTM4-204ENST00000563952 IGLV3-9A0A075B6K5 115 aa26.33■■□□□ 1.81
CMTM4-204ENST00000563952 GYG2O15488 501 aa26.33■■□□□ 1.81
CMTM4-204ENST00000563952 GPANK1O95872 356 aa26.33■■□□□ 1.81
CMTM4-204ENST00000563952 CRABP1P29762 137 aa26.33■■□□□ 1.81
CMTM4-204ENST00000563952 GLO1Q04760 184 aa26.33■■□□□ 1.81
CMTM4-204ENST00000563952 CLEC12AQ5QGZ9 265 aa26.33■■□□□ 1.81
CMTM4-204ENST00000563952 OR2T5Q6IEZ7 315 aa26.33■■□□□ 1.81
CMTM4-204ENST00000563952 UNQ6126/PRO20091Q6UXV3 157 aa26.33■■□□□ 1.81
CMTM4-204ENST00000563952 ZSCAN2Q7Z7L9 614 aaPredicted RBP26.33■■□□□ 1.81
CMTM4-204ENST00000563952 ZNF786Q8N393 782 aa26.33■■□□□ 1.81
CMTM4-204ENST00000563952 OR2T29Q8NH02 315 aa26.33■■□□□ 1.81
CMTM4-204ENST00000563952 ABHD4Q8TB40 342 aa26.33■■□□□ 1.81
CMTM4-204ENST00000563952 POP5Q969H6 163 aaKnown RBP26.33■■□□□ 1.81
CMTM4-204ENST00000563952 REEP1Q9H902 201 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms