RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 SPRY3O43610 288 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 GMNNO75496 209 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 DIRAS1O95057 198 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 CD14P08571 375 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 ZNF81P51508 661 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 PCBD1P61457 104 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 MVKQ03426 396 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 ENDOGQ14249 297 aaKnown RBP15.09■□□□□ 0.01
NME3-205ENST00000563854 MOGQ16653 247 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 PCGF3Q3KNV8 242 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 ZNF718Q3SXZ3 478 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 MESTQ5EB52 335 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 GLYATQ6IB77 296 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 UGT2A3Q6UWM9 527 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 TMPRSS11FQ6ZWK6 438 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 GLCCI1Q86VQ1 547 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 FAM156AQ8NDB6 213 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 SLC7A13Q8TCU3 470 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 RASD2Q96D21 266 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 MYLK2Q9H1R3 596 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 POLE4Q9NR33 117 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 ABCD2Q9UBJ2 740 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 IL20RAQ9UHF4 553 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 TIMM10BQ9Y5J6 103 aa15.09■□□□□ 0.01
NME3-205ENST00000563854 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.09■□□□□ 0.019e-14■■■■□ 24.2
NME3-205ENST00000563854 TEX13CA0A0J9YWL9 993 aa15.08■□□□□ 0
NME3-205ENST00000563854 C12orf71A8MTZ7 269 aa15.08■□□□□ 0
NME3-205ENST00000563854 RP2O75695 350 aa15.08■□□□□ 0
NME3-205ENST00000563854 IGHV3-13P01766 116 aa15.08■□□□□ 0
NME3-205ENST00000563854 ZNF26P17031 533 aaPredicted RBP15.08■□□□□ 0
NME3-205ENST00000563854 TMEM33P57088 247 aa15.08■□□□□ 0
NME3-205ENST00000563854 PPP1CBP62140 327 aa15.08■□□□□ 0
NME3-205ENST00000563854 MRPS11P82912 194 aaKnown RBP15.08■□□□□ 0
NME3-205ENST00000563854 KRR1Q13601 381 aaKnown RBP15.08■□□□□ 0
NME3-205ENST00000563854 OTPQ5XKR4 325 aa15.08■□□□□ 0
NME3-205ENST00000563854 UNQ6126/PRO20091Q6UXV3 157 aa15.08■□□□□ 0
NME3-205ENST00000563854 USP51Q70EK9 711 aa15.08■□□□□ 0
NME3-205ENST00000563854 TSEN54Q7Z6J9 526 aaKnown RBP15.08■□□□□ 0
NME3-205ENST00000563854 FAM86B1Q8N7N1 296 aa15.08■□□□□ 0
NME3-205ENST00000563854 OR2J1Q9GZK6 312 aa15.08■□□□□ 0
NME3-205ENST00000563854 ANKRD19PQ9H560 264 aa15.08■□□□□ 0
NME3-205ENST00000563854 SAP30LQ9HAJ7 183 aa15.08■□□□□ 0
NME3-205ENST00000563854 SAMD4AQ9UPU9 718 aaKnown RBP15.08■□□□□ 0
NME3-205ENST00000563854 IGHV1-69-2A0A0G2JMI3 117 aa15.07■□□□□ 0
NME3-205ENST00000563854 PLSCR5A0PG75 271 aa15.07■□□□□ 0
NME3-205ENST00000563854 B4DSR2 109 aa15.07■□□□□ 0
NME3-205ENST00000563854 FAM157AC9JC47 383 aa15.07■□□□□ 0
NME3-205ENST00000563854 NDUFB2O95178 105 aa15.07■□□□□ 0
NME3-205ENST00000563854 TFP02787 698 aa15.07■□□□□ 0
NME3-205ENST00000563854 SCG5P05408 212 aa15.07■□□□□ 0
NME3-205ENST00000563854 DVL1P1P54792 670 aaPredicted RBP15.07■□□□□ 0
NME3-205ENST00000563854 TEKQ02763 1124 aa15.07■□□□□ 0
NME3-205ENST00000563854 KRT72Q14CN4 511 aa15.07■□□□□ 0
NME3-205ENST00000563854 KRTAP24-1Q3LI83 254 aa15.07■□□□□ 0
NME3-205ENST00000563854 FOXL2NBQ6ZUU3 175 aa15.07■□□□□ 0
NME3-205ENST00000563854 ZNF771Q7L3S4 317 aaPredicted RBP15.07■□□□□ 0
NME3-205ENST00000563854 CPLX4Q7Z7G2 160 aa15.07■□□□□ 0
NME3-205ENST00000563854 OR52J3Q8NH60 311 aa15.07■□□□□ 0
NME3-205ENST00000563854 KLF14Q8TD94 323 aaPredicted RBP15.07■□□□□ 0
NME3-205ENST00000563854 MARS2Q96GW9 593 aaKnown RBP15.07■□□□□ 0
NME3-205ENST00000563854 RSRC1Q96IZ7 334 aaKnown RBP15.07■□□□□ 0
NME3-205ENST00000563854 NDUFAF4Q9P032 175 aa15.07■□□□□ 0
NME3-205ENST00000563854 AURKCQ9UQB9 309 aa15.07■□□□□ 0
NME3-205ENST00000563854 CACNG2Q9Y698 323 aa15.07■□□□□ 0
NME3-205ENST00000563854 TRBV4-1A0A0J9YWV2 114 aa15.06■□□□□ 0
NME3-205ENST00000563854 A0A1W2PRQ8 180 aa15.06■□□□□ 0
NME3-205ENST00000563854 PRSS37A4D1T9 235 aa15.06■□□□□ 0
NME3-205ENST00000563854 SOCS2O14508 198 aa15.06■□□□□ 0
NME3-205ENST00000563854 DOK2O60496 412 aa15.06■□□□□ 0
NME3-205ENST00000563854 ABHD16AO95870 558 aa15.06■□□□□ 0
NME3-205ENST00000563854 NGFP01138 241 aa15.06■□□□□ 0
NME3-205ENST00000563854 RHCEP18577 417 aa15.06■□□□□ 0
NME3-205ENST00000563854 PRDX6P30041 224 aa15.06■□□□□ 0
NME3-205ENST00000563854 HTR5AP47898 357 aa15.06■□□□□ 0
NME3-205ENST00000563854 ARHGDIAP52565 204 aa15.06■□□□□ 0
NME3-205ENST00000563854 DGCR6Q14129 220 aa15.06■□□□□ 0
NME3-205ENST00000563854 TMEM255AQ5JRV8 349 aa15.06■□□□□ 0
NME3-205ENST00000563854 FAM122BQ7Z309 247 aa15.06■□□□□ 0
NME3-205ENST00000563854 C4orf45Q96LM5 186 aa15.06■□□□□ 0
NME3-205ENST00000563854 SYT4Q9H2B2 425 aa15.06■□□□□ 0
NME3-205ENST00000563854 ELOVL3Q9HB03 270 aa15.06■□□□□ 0
NME3-205ENST00000563854 KRCC1Q9NPI7 259 aaPredicted RBP15.06■□□□□ 0
NME3-205ENST00000563854 DCAF13Q9NV06 445 aaKnown RBP15.06■□□□□ 0
NME3-205ENST00000563854 NKIRAS2Q9NYR9 191 aa15.06■□□□□ 0
NME3-205ENST00000563854 NDRG4Q9ULP0 352 aaKnown RBP15.06■□□□□ 0
NME3-205ENST00000563854 ZSCAN5BA6NJL1 495 aa15.05■□□□□ -0
NME3-205ENST00000563854 CLDN25C9JDP6 229 aa15.05■□□□□ -0
NME3-205ENST00000563854 IMPA2O14732 288 aa15.05■□□□□ -0
NME3-205ENST00000563854 TIMM8AO60220 97 aaPredicted RBP15.05■□□□□ -0
NME3-205ENST00000563854 SNX3O60493 162 aa15.05■□□□□ -0
NME3-205ENST00000563854 SLC16A7O60669 478 aa15.05■□□□□ -0
NME3-205ENST00000563854 IGHV1-46P01743 117 aa15.05■□□□□ -0
NME3-205ENST00000563854 MSMBP08118 114 aa15.05■□□□□ -0
NME3-205ENST00000563854 GAAP10253 952 aa15.05■□□□□ -0
NME3-205ENST00000563854 CTLA4P16410 223 aa15.05■□□□□ -0
NME3-205ENST00000563854 PCMT1P22061 227 aa15.05■□□□□ -0
NME3-205ENST00000563854 SDHAP31040 664 aa15.05■□□□□ -0
NME3-205ENST00000563854 CRYBB2P43320 205 aa15.05■□□□□ -0
NME3-205ENST00000563854 LIMS1P48059 325 aa15.05■□□□□ -0
NME3-205ENST00000563854 CENPAP49450 140 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms