RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 NR4A2P43354 598 aa16.32■□□□□ 0.2
TRADD-203ENST00000563348 MAGEA2P43356 314 aa16.32■□□□□ 0.2
TRADD-203ENST00000563348 GSSP48637 474 aa16.32■□□□□ 0.2
TRADD-203ENST00000563348 GDI2P50395 445 aaKnown RBP16.32■□□□□ 0.2
TRADD-203ENST00000563348 SELENOVP59797 346 aa16.32■□□□□ 0.2
TRADD-203ENST00000563348 UGT2A3Q6UWM9 527 aa16.32■□□□□ 0.2
TRADD-203ENST00000563348 DHFR2Q86XF0 187 aa16.32■□□□□ 0.2
TRADD-203ENST00000563348 ZNF786Q8N393 782 aa16.32■□□□□ 0.2
TRADD-203ENST00000563348 ZNF540Q8NDQ6 660 aa16.32■□□□□ 0.2
TRADD-203ENST00000563348 UBASH3BQ8TF42 649 aa16.32■□□□□ 0.2
TRADD-203ENST00000563348 SYT4Q9H2B2 425 aa16.32■□□□□ 0.2
TRADD-203ENST00000563348 OR51B6Q9H340 312 aa16.32■□□□□ 0.2
TRADD-203ENST00000563348 IGLV3-9A0A075B6K5 115 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 C5orf49A4QMS7 147 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 SOCS2O14508 198 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 ARPC3O15145 178 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 SLC16A7O60669 478 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 KHDRBS3O75525 346 aaKnown RBP16.31■□□□□ 0.2
TRADD-203ENST00000563348 CLPTM1O96005 669 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 GIFP27352 417 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 SLC6A6P31641 620 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 CDKN2AP42771 156 aaKnown RBP16.31■□□□□ 0.2
TRADD-203ENST00000563348 ERVS71-1P61550 626 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 MAD2L1BPQ15013 274 aaPredicted RBP16.31■□□□□ 0.2
TRADD-203ENST00000563348 ZNF774Q6NX45 483 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 PTCHD4Q6ZW05 846 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 SYNPRQ8TBG9 265 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 GNPDA2Q8TDQ7 276 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 POP5Q969H6 163 aaKnown RBP16.31■□□□□ 0.2
TRADD-203ENST00000563348 ERMAPQ96PL5 475 aaPredicted RBP16.31■□□□□ 0.2
TRADD-203ENST00000563348 TRIM15Q9C019 465 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 OR52D1Q9H346 318 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 TPK1Q9H3S4 243 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 MAGIXQ9H6Y5 334 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 EMC7Q9NPA0 242 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 EIF3KQ9UBQ5 218 aaKnown RBP16.31■□□□□ 0.2
TRADD-203ENST00000563348 LYVE1Q9Y5Y7 322 aa16.31■□□□□ 0.2
TRADD-203ENST00000563348 A0A1W2PPW3 197 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 TNFRSF11BO00300 401 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 PPP1R3DO95685 299 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 WNT5AP41221 380 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 TSPAN31Q12999 210 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 PGBD2Q6P3X8 592 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 TRPM8Q7Z2W7 1104 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 GLB1L2Q8IW92 636 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 LINC00471Q8N535 108 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 OR1J1Q8NGS3 322 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 FANK1Q8TC84 345 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 BCAS4Q8TDM0 211 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 NUAK2Q9H093 628 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 RERGLQ9H628 205 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 YAE1D1Q9NRH1 226 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 SLCO1C1Q9NYB5 712 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 TAAR3PQ9P1P4 343 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 GPR160Q9UJ42 338 aa16.3■□□□□ 0.2
TRADD-203ENST00000563348 COA3Q9Y2R0 106 aaPredicted RBP16.3■□□□□ 0.2
TRADD-203ENST00000563348 YLPM1P49750 1951 aaKnown RBP16.29■□□□□ 0.2
TRADD-203ENST00000563348 KLF3P57682 345 aaPredicted RBP16.29■□□□□ 0.2
TRADD-203ENST00000563348 LSM6P62312 80 aaKnown RBP16.29■□□□□ 0.2
TRADD-203ENST00000563348 SCRN3Q0VDG4 424 aa16.29■□□□□ 0.2
TRADD-203ENST00000563348 GGTLC2Q14390 218 aa16.29■□□□□ 0.2
TRADD-203ENST00000563348 UNQ6126/PRO20091Q6UXV3 157 aa16.29■□□□□ 0.2
TRADD-203ENST00000563348 C1orf174Q8IYL3 243 aa16.29■□□□□ 0.2
TRADD-203ENST00000563348 ZNF101Q8IZC7 436 aa16.29■□□□□ 0.2
TRADD-203ENST00000563348 ICA1LQ8NDH6 482 aa16.29■□□□□ 0.2
TRADD-203ENST00000563348 OR4C15Q8NGM1 316 aa16.29■□□□□ 0.2
TRADD-203ENST00000563348 SAMD8Q96LT4 415 aa16.29■□□□□ 0.2
TRADD-203ENST00000563348 BPESC1Q9GZL8 116 aa16.29■□□□□ 0.2
TRADD-203ENST00000563348 CHD3Q12873 2000 aaKnown RBP16.28■□□□□ 0.2
TRADD-203ENST00000563348 IGHV4-61A0A0C4DH41 118 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 IDH3BO43837 385 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 ICMTO60725 284 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 CRLF1O75462 422 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 COX5BP10606 129 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 NAT2P11245 290 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 CRABP1P29762 137 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 KCNMB1Q16558 191 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 MOGQ16653 247 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 NKPD1Q17RQ9 610 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 ZNF718Q3SXZ3 478 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 CYB5R2Q6BCY4 276 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 ZNF770Q6IQ21 691 aaPredicted RBP16.28■□□□□ 0.2
TRADD-203ENST00000563348 ASB9Q96DX5 294 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 CLPTM1LQ96KA5 538 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 SNX18Q96RF0 628 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 THTPAQ9BU02 230 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 IFT27Q9BW83 186 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 NDRG4Q9ULP0 352 aaKnown RBP16.28■□□□□ 0.2
TRADD-203ENST00000563348 B9D1Q9UPM9 204 aa16.28■□□□□ 0.2
TRADD-203ENST00000563348 ATRQ13535 2644 aa16.27■□□□□ 0.2
TRADD-203ENST00000563348 A8MV72 311 aaPredicted RBP16.27■□□□□ 0.2
TRADD-203ENST00000563348 LYNX1G3V0Z9 82 aa16.27■□□□□ 0.2
TRADD-203ENST00000563348 ACOT8O14734 319 aa16.27■□□□□ 0.2
TRADD-203ENST00000563348 MPZL1O95297 269 aa16.27■□□□□ 0.2
TRADD-203ENST00000563348 IGHV3-13P01766 116 aa16.27■□□□□ 0.2
TRADD-203ENST00000563348 HPXP02790 462 aa16.27■□□□□ 0.2
TRADD-203ENST00000563348 IGHV4-31P0DP07 118 aa16.27■□□□□ 0.2
TRADD-203ENST00000563348 LYNX1P0DP58 116 aa16.27■□□□□ 0.2
TRADD-203ENST00000563348 HIST1H1CP16403 213 aaKnown RBP16.27■□□□□ 0.2
TRADD-203ENST00000563348 TRAP1Q12931 704 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms