RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 CENPVL3A0A0U1RRI6 287 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 F6UB75 175 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 GCM2O75603 506 aaPredicted RBP1.48□□□□□ -2.17
CHD9-207ENST00000562806 CCNKO75909 580 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 SERPIND1P05546 499 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 CT62P0C5K7 136 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 RAB3AP20336 220 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 DCKP27707 260 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 MAS1LP35410 378 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 ZNF138P52744 262 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 BST2Q10589 180 aaKnown RBP1.48□□□□□ -2.17
CHD9-207ENST00000562806 IFT88Q13099 833 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 CHIT1Q13231 466 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 GK3PQ14409 553 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 SSX2Q16385 188 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 VPS26BQ4G0F5 336 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 AVPI1Q5T686 147 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 METTL21CQ5VZV1 264 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 ZFP1Q6P2D0 407 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 NCCRP1Q6ZVX7 275 aaPredicted RBP1.48□□□□□ -2.17
CHD9-207ENST00000562806 SNX20Q7Z614 316 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 NBPF5PQ86XG9 351 aaPredicted RBP1.48□□□□□ -2.17
CHD9-207ENST00000562806 ZCCHC7Q8N3Z6 543 aaKnown RBP1.48□□□□□ -2.17
CHD9-207ENST00000562806 EIF1ADQ8N9N8 165 aaKnown RBP1.48□□□□□ -2.17
CHD9-207ENST00000562806 OR1L6Q8NGR2 347 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 OR8U1Q8NH10 309 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 FAM110BQ8TC76 370 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 C17orf50Q8WW18 174 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 FLYWCH2Q96CP2 140 aaKnown RBP1.48□□□□□ -2.17
CHD9-207ENST00000562806 DNAJC1Q96KC8 554 aaKnown RBP1.48□□□□□ -2.17
CHD9-207ENST00000562806 FOXC2Q99958 501 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 CRACR2AQ9BSW2 395 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 EXTL2Q9UBQ6 330 aa1.48□□□□□ -2.17
CHD9-207ENST00000562806 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.48□□□□□ -2.17
CHD9-207ENST00000562806 DHX57Q6P158 1386 aaKnown RBP1.47□□□□□ -2.17
CHD9-207ENST00000562806 TUBGCP6Q96RT7 1819 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 PCM1Q15154 2024 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 BTBD17A6NE02 478 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 UBXN8O00124 270 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 CPLX1O14810 134 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 CHMP2AO43633 222 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 CDC40O60508 579 aaKnown RBP eCLIP1.47□□□□□ -2.17
CHD9-207ENST00000562806 CDRT1O95170 752 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 SLC11A1P49279 550 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 HNMTP50135 292 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 PLP1P60201 277 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 IRX3P78415 501 aaPredicted RBP1.47□□□□□ -2.17
CHD9-207ENST00000562806 FLI1Q01543 452 aaPredicted RBP1.47□□□□□ -2.17
CHD9-207ENST00000562806 CDH17Q12864 832 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 PPP1R7Q15435 360 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 ZSCAN26Q16670 478 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 ANKDD1AQ495B1 522 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 PTPN20Q4JDL3 420 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 PHYHD1Q5SRE7 291 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 RAET1LQ5VY80 246 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 GALNT17Q6IS24 598 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 ANKRD26P1Q6NSI1 321 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 H3F3CQ6NXT2 135 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 CEMP1Q6PRD7 247 aaPredicted RBP1.47□□□□□ -2.17
CHD9-207ENST00000562806 FBXW12Q6X9E4 464 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 CERS6Q6ZMG9 384 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 CDKL3Q8IVW4 592 aaPredicted RBP1.47□□□□□ -2.17
CHD9-207ENST00000562806 METTL13Q8N6R0 699 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 NECAB1Q8N987 351 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 APCDD1LQ8NCL9 501 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 OR4K5Q8NGD3 323 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 OR2A1Q8NGT9 310 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 PLPPR1Q8TBJ4 325 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 PIFOQ8TCI5 191 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 SLC25A46Q96AG3 418 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 C12orf42Q96LP6 360 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 TIMM17AQ99595 171 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 ROPN1BQ9BZX4 212 aaPredicted RBP1.47□□□□□ -2.17
CHD9-207ENST00000562806 EXOSC4Q9NPD3 245 aaKnown RBP1.47□□□□□ -2.17
CHD9-207ENST00000562806 COX16Q9P0S2 106 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 USP47Q96K76 1375 aa1.47□□□□□ -2.17
CHD9-207ENST00000562806 GLYATL1P3A0A0U1RQE8 302 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 ZNF816-ZNF321PA0A0X1KG74 233 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 KIR2DS1A0A191URI9 304 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 SPECC1L-ADORA2AF8WAN1 911 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 PPP1R2P9O14990 202 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 SOCS1O15524 211 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 CHST10O43529 356 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 DPM1O60762 260 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 OR5H8P0DN80 308 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 SLC2A3P11169 496 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 TNNI1P19237 187 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 P2RX1P51575 399 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 CCNHP51946 323 aaPredicted RBP1.46□□□□□ -2.18
CHD9-207ENST00000562806 ACTG2P63267 376 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 MXD1Q05195 221 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 ZNF616Q08AN1 781 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 SLC39A6Q13433 755 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 KIR2DS1Q14954 304 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 ZMYND11Q15326 602 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 TCEAL5Q5H9L2 206 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 SPECC1LQ69YQ0 1117 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 CENPPQ6IPU0 288 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 UQCC3Q6UW78 93 aa1.46□□□□□ -2.18
CHD9-207ENST00000562806 UBE2J2Q8N2K1 259 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms